RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CD276Q5ZPR3 534 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 RUSC1-AS1Q66K80 236 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 FGFRL1Q8N441 504 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 SLC7A6OSQ96CW6 309 aaPredicted RBP17.17■□□□□ 0.34
SDCBP-209ENST00000522243 SEH1LQ96EE3 360 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 ZMAT3Q9HA38 289 aaKnown RBP17.17■□□□□ 0.34
SDCBP-209ENST00000522243 POMPQ9Y244 141 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 TCRBV3S1A0A5B6 114 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 DVL1O14640 695 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 PRODHO43272 600 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 TOX4O94842 621 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 RNASE1P07998 156 aaKnown RBP17.16■□□□□ 0.34
SDCBP-209ENST00000522243 GNALP38405 381 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 GPR157Q5UAW9 335 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 TEX36Q5VZQ5 186 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 WDR82Q6UXN9 313 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 RHOUQ7L0Q8 258 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 ZNF454Q8N9F8 522 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 CSNK2A3Q8NEV1 391 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 ZDHHC16Q969W1 377 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 SLC25A28Q96A46 364 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 YY1AP1Q9H869 796 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 RNPEPL1Q9HAU8 725 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 TNFRSF19Q9NS68 423 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 DNAJB9Q9UBS3 223 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 ANK2Q01484 3957 aa17.16■□□□□ 0.34
SDCBP-209ENST00000522243 A0A1B0GW55 424 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 ZNF850A8MQ14 1090 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 ZNF879B4DU55 563 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 TMPRSS2O15393 492 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 HOXA3O43365 443 aaPredicted RBP17.15■□□□□ 0.34
SDCBP-209ENST00000522243 DUX4L2P0CJ85 424 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 DUX4L3P0CJ86 424 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 DUX4L4P0CJ87 422 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 DUX4L5P0CJ88 424 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 DUX4L6P0CJ89 424 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 DUX4L7P0CJ90 424 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 SLC2A5P22732 501 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 ACKR3P25106 362 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 GMFBP60983 142 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 APOFQ13790 326 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 SLC35D3Q5M8T2 416 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 DUX4L9Q6RFH8 374 aaPredicted RBP17.15■□□□□ 0.34
SDCBP-209ENST00000522243 BTN2A1Q7KYR7 527 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 ST8SIA4Q92187 359 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 LYZL4Q96KX0 146 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 TBX15Q96SF7 602 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 CCL13Q99616 98 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 TVP23BQ9NYZ1 205 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 DUX4Q9UBX2 424 aa17.15■□□□□ 0.34
SDCBP-209ENST00000522243 ANXA2P2A6NMY6 339 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 PSMD9O00233 223 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 CDIPTO14735 213 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 TIPRLO75663 272 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 DNAJC8O75937 253 aaPredicted RBP17.14■□□□□ 0.33
SDCBP-209ENST00000522243 LIPFP07098 398 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 MRPL3P09001 348 aaKnown RBP17.14■□□□□ 0.33
SDCBP-209ENST00000522243 MMP9P14780 707 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 HOXB6P17509 224 aaKnown RBP17.14■□□□□ 0.33
SDCBP-209ENST00000522243 ARF6P62330 175 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 PRDX4Q13162 271 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 SNAPC1Q16533 368 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 KRT77Q7Z794 578 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 PNLDC1Q8NA58 520 aaKnown RBP17.14■□□□□ 0.33
SDCBP-209ENST00000522243 PAPD5Q8NDF8 572 aaKnown RBP17.14■□□□□ 0.33
SDCBP-209ENST00000522243 OR8B12Q8NGG6 310 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 PIGCQ92535 297 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 ITPKCQ96DU7 683 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 WDFY2Q96P53 400 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 MICU1Q9BPX6 476 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 RGCCQ9H4X1 137 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 SLC25A19Q9HC21 320 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 KIF17Q9P2E2 1029 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 LAMP5Q9UJQ1 280 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 LRP12Q9Y561 859 aa17.14■□□□□ 0.33
SDCBP-209ENST00000522243 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.13■□□□□ 0.33
SDCBP-209ENST00000522243 CLDN34H7C241 214 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 P2RY10O00398 339 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 ALOX5APP20292 161 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 CRISP1P54107 249 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 PSMA6P60900 246 aaKnown RBP17.13■□□□□ 0.33
SDCBP-209ENST00000522243 MICBQ29980 383 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 WDR38Q5JTN6 314 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 METTL11BQ5VVY1 283 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 KCTD8Q6ZWB6 473 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 GALNT4Q8N4A0 578 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 OR5T2Q8NGG2 359 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 RPL3LQ92901 407 aaKnown RBP17.13■□□□□ 0.33
SDCBP-209ENST00000522243 ZNF747Q9BV97 191 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 TEX12Q9BXU0 123 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 TTTY10Q9BZA0 68 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 FGF23Q9GZV9 251 aaPredicted RBP17.13■□□□□ 0.33
SDCBP-209ENST00000522243 KAAG1Q9UBP8 84 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 MPC1Q9Y5U8 109 aa17.13■□□□□ 0.33
SDCBP-209ENST00000522243 CENPVL3A0A0U1RRI6 287 aa17.12■□□□□ 0.33
SDCBP-209ENST00000522243 SPRY1O43609 319 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-209ENST00000522243 MUC1P15941 1255 aaPredicted RBP17.12■□□□□ 0.33
SDCBP-209ENST00000522243 IL5RAQ01344 420 aa17.12■□□□□ 0.33
SDCBP-209ENST00000522243 FTMTQ8N4E7 242 aa17.12■□□□□ 0.33
SDCBP-209ENST00000522243 FAM216BQ8N7L0 139 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms