RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 MS4A2Q01362 244 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 TRIM25Q14258 630 aaKnown RBP16.22■□□□□ 0.19
PABPC1-215ENST00000520804 FAM98BQ52LJ0 330 aaKnown RBP16.22■□□□□ 0.19
PABPC1-215ENST00000520804 KLHL12Q53G59 568 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 WDR82Q6UXN9 313 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 RHOUQ7L0Q8 258 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 OR10G2Q8NGC3 310 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 TEX47Q8TBZ9 253 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 SSMEM1Q8WWF3 244 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 AMELYQ99218 206 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 CCL13Q99616 98 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 PPP1R3EQ9H7J1 279 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 CNTD2Q9H8S5 307 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 DNAJC27Q9NZQ0 273 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 ZNF319Q9P2F9 582 aa16.22■□□□□ 0.19
PABPC1-215ENST00000520804 A0A1B0GW55 424 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-215ENST00000520804 GLCEO94923 617 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 DUX4L2P0CJ85 424 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 DUX4L3P0CJ86 424 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 DUX4L4P0CJ87 422 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 DUX4L5P0CJ88 424 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 DUX4L6P0CJ89 424 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 DUX4L7P0CJ90 424 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 OPRL1P41146 370 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 ELF3P78545 371 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-215ENST00000520804 CDONQ4KMG0 1287 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 WDR38Q5JTN6 314 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 OLFML2AQ68BL7 652 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 DUX4L9Q6RFH8 374 aaPredicted RBP16.21■□□□□ 0.19
PABPC1-215ENST00000520804 C17orf107Q6ZR85 190 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 SHFQ7M4L6 423 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 TIGD4Q8IY51 512 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 FGFRL1Q8N441 504 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 IQCF1Q8N6M8 205 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 CSNK2A3Q8NEV1 391 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 TBC1D15Q8TC07 691 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 OTULINQ96BN8 352 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 TLNRD1Q9H1K6 362 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 OR10A2Q9H208 303 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 DUX4Q9UBX2 424 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 RHBDD3Q9Y3P4 386 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 KPTNQ9Y664 436 aa16.21■□□□□ 0.19
PABPC1-215ENST00000520804 H3BN98 237 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 GNALP38405 381 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 NAA10P41227 235 aaPredicted RBP16.2■□□□□ 0.18
PABPC1-215ENST00000520804 RPL15P61313 204 aaKnown RBP16.2■□□□□ 0.18
PABPC1-215ENST00000520804 SRSF4Q08170 494 aaKnown RBP16.2■□□□□ 0.18
PABPC1-215ENST00000520804 GK3PQ14409 553 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 SNCBQ16143 134 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 GFOD2Q3B7J2 385 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 SLC36A1Q7Z2H8 476 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 LDLRAD3Q86YD5 345 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 GALNT4Q8N4A0 578 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 SCCPDHQ8NBX0 429 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 LY6G5BQ8NDX9 201 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 DYRK2Q92630 601 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 C12orf43Q96C57 262 aaKnown RBP16.2■□□□□ 0.18
PABPC1-215ENST00000520804 PGAM5Q96HS1 289 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 NSL1Q96IY1 281 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 FEVQ99581 238 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 PAPOLGQ9BWT3 736 aaKnown RBP16.2■□□□□ 0.18
PABPC1-215ENST00000520804 RGCCQ9H4X1 137 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 BRD7Q9NPI1 651 aa16.2■□□□□ 0.18
PABPC1-215ENST00000520804 A0A0U1RQK1 487 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 CLPSL1A2RUU4 121 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 CDIPTO14735 213 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 H2BFMP0C1H6 154 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 RAP2AP10114 183 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 IL5RAQ01344 420 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 VMO1Q7Z5L0 202 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 PDZD9Q8IXQ8 264 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 FTMTQ8N4E7 242 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 FAM216BQ8N7L0 139 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 GIPC3Q8TF64 312 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 ITPKCQ96DU7 683 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 SEH1LQ96EE3 360 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 DMRTB1Q96MA1 342 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 MICU1Q9BPX6 476 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 OR51V1Q9H2C8 321 aa16.19■□□□□ 0.18
PABPC1-215ENST00000520804 PRPF19Q9UMS4 504 aaKnown RBP16.19■□□□□ 0.18
PABPC1-215ENST00000520804 A0A1B0GVI7 797 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 ARRDC5A6NEK1 342 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 ANXA2P2A6NMY6 339 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 ACOT8O14734 319 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 GPR37O15354 613 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 NDUFB3O43676 98 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 IGHV4-59P01825 116 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 AMY2BP19961 511 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 PAICSP22234 425 aaKnown RBP16.18■□□□□ 0.18
PABPC1-215ENST00000520804 IER3P46695 156 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 STUMQ69YW2 141 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 PIP4P2Q8N4L2 257 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 CITED1Q99966 193 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 PDP1Q9P0J1 537 aaPredicted RBP16.18■□□□□ 0.18
PABPC1-215ENST00000520804 MPC1Q9Y5U8 109 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 CMYA5Q8N3K9 4069 aa16.18■□□□□ 0.18
PABPC1-215ENST00000520804 GPR137BO60478 399 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 LYNP07948 512 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 TGM4P49221 684 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms