RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 MED21Q13503 144 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 ALG10BQ5I7T1 473 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PABPC1L2AQ5JQF8 200 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 TMEM255AQ5JRV8 349 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 FAM209BQ5JX69 171 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 IL23RQ5VWK5 629 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 OR4F3Q6IEY1 312 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 ETFRF1Q6IPR1 90 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 LCN8Q6JVE9 175 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 ULK3Q6PHR2 472 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 IZUMO2Q6UXV1 221 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 DLEU7Q6UYE1 221 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 NHLRC1Q6VVB1 395 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 ZNF841Q6ZN19 808 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 MSANTD1Q6ZTZ1 278 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 RFPL4BQ6ZWI9 263 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 FKBP9P1Q75LS8 142 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 SLC35D2Q76EJ3 337 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 HMGN2P46Q86SG4 172 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 SERPINA11Q86U17 422 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 IGFN1Q86VF2 1251 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 CALHM3Q86XJ0 350 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 CMTM4Q8IZR5 234 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 CLEC4FQ8N1N0 589 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 KRTCAP2Q8N6L1 136 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PACRGLQ8N7B6 248 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 C11orf44Q8N8P7 122 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 ANKFN1Q8N957 763 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 ZBTB34Q8NCN2 500 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 BBS1Q8NFJ9 593 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 OR8J3Q8NGG0 315 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 OR9I1Q8NGQ6 314 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 OR13G1Q8NGZ3 307 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 OR5J2Q8NH18 312 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 NSMAFQ92636 917 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 TESCQ96BS2 214 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 TPD52L3Q96J77 140 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 ZNF583Q96ND8 569 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 TECTBQ96PL2 329 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 KCTD14Q9BQ13 255 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-207ENST00000520168 WACQ9BTA9 647 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 C1orf50Q9BV19 199 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 NPFFR1Q9GZQ6 430 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 SIRPDQ9H106 197 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PPA2Q9H2U2 334 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 RMND5AQ9H871 391 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 SIAEQ9HAT2 523 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 PALMDQ9NP74 551 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 RLIMQ9NVW2 624 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 NDUFA13Q9P0J0 144 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 SCOCQ9UIL1 159 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 RPUSD1Q9UJJ7 312 aaKnown RBP4.01□□□□□ -1.77
SDCBP-207ENST00000520168 NDRG4Q9ULP0 352 aaKnown RBP4.01□□□□□ -1.77
SDCBP-207ENST00000520168 RAB26Q9ULW5 256 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 FOXJ3Q9UPW0 622 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 GAB2Q9UQC2 676 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 MAB21L2Q9Y586 359 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 STARD9Q9P2P6 4700 aa4.01□□□□□ -1.77
SDCBP-207ENST00000520168 LOC100509620A0A075B734 347 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 WI2-2373I1.2A0A1W2PRP0 233 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 C5orf51A6NDU8 294 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 FXYD1O00168 92 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 NME4O00746 187 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 UBE2CO00762 179 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 PLPP3O14495 311 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 GATCO43716 136 aaKnown RBP4□□□□□ -1.77
SDCBP-207ENST00000520168 PFDN1O60925 122 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 PTP4A3O75365 173 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 SCAF4O95104 1147 aaKnown RBP4□□□□□ -1.77
SDCBP-207ENST00000520168 CPSF4O95639 269 aaKnown RBP4□□□□□ -1.77
SDCBP-207ENST00000520168 KRT75O95678 551 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 ABHD16AO95870 558 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 CYB5R3P00387 301 aaPredicted RBP4□□□□□ -1.77
SDCBP-207ENST00000520168 BGLAPP02818 100 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 ALDOBP05062 364 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 STAG3L3P0CL85 134 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 ADORA3P0DMS8 318 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 VSIG10L2P0DP72 767 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 COX5BP10606 129 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 G6PDP11413 515 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 FASP25445 335 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 PEX2P28328 305 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 IL12AP29459 219 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 S100A3P33764 101 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 MSX2P35548 267 aaPredicted RBP4□□□□□ -1.77
SDCBP-207ENST00000520168 RGS6P49758 472 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 BMXP51813 675 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 ZNF133P52736 654 aaPredicted RBP4□□□□□ -1.77
SDCBP-207ENST00000520168 ATP5IP56385 69 aaPredicted RBP4□□□□□ -1.77
SDCBP-207ENST00000520168 CLRN1P58418 232 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 PCBD1P61457 104 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 MRPS34P82930 218 aaKnown RBP4□□□□□ -1.77
SDCBP-207ENST00000520168 LIPEQ05469 1076 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 ACSM1Q08AH1 577 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 HIST3H3Q16695 136 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 CDONQ4KMG0 1287 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 SPRNQ5BIV9 151 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 SAPCD1Q5SSQ6 148 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 C10orf128Q5T292 105 aa4□□□□□ -1.77
SDCBP-207ENST00000520168 NANOGP8Q6NSW7 305 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms