RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 KLK13Q9UKR3 277 aa23.15■■□□□ 1.3
COL13A1-210ENST00000517713 SSNA1O43805 119 aa23.14■■□□□ 1.29
COL13A1-210ENST00000517713 MELTFP08582 738 aa23.14■■□□□ 1.29
COL13A1-210ENST00000517713 RAD52P43351 418 aa23.14■■□□□ 1.29
COL13A1-210ENST00000517713 NOVA1P51513 510 aaKnown RBP23.14■■□□□ 1.29
COL13A1-210ENST00000517713 MECP2P51608 486 aaKnown RBP23.14■■□□□ 1.29
COL13A1-210ENST00000517713 CRIP3Q6Q6R5 217 aa23.14■■□□□ 1.29
COL13A1-210ENST00000517713 FJX1Q86VR8 437 aa23.14■■□□□ 1.29
COL13A1-210ENST00000517713 OR51S1Q8NGJ8 323 aa23.14■■□□□ 1.29
COL13A1-210ENST00000517713 MS4A3Q96HJ5 214 aa23.14■■□□□ 1.29
COL13A1-210ENST00000517713 GINS4Q9BRT9 223 aa23.14■■□□□ 1.29
COL13A1-210ENST00000517713 NICN1Q9BSH3 213 aa23.14■■□□□ 1.29
COL13A1-210ENST00000517713 ZNF222Q9UK12 451 aa23.14■■□□□ 1.29
COL13A1-210ENST00000517713 CYB5AP00167 134 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 ACKR3P25106 362 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 PTGFRP43088 359 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 BANF2Q9H503 90 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 ZNF391Q9UJN7 358 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 RAB3DO95716 219 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 FCGR2AP12318 317 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 ERP29P30040 261 aaKnown RBP23.13■■□□□ 1.29
COL13A1-210ENST00000517713 GZMKP49863 264 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 PMP22Q01453 160 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 IFITM2Q01629 132 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 RIPPLY1Q0D2K3 151 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 IGFL2Q6UWQ7 119 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 GLDNQ6ZMI3 551 aaPredicted RBP23.13■■□□□ 1.29
COL13A1-210ENST00000517713 NUFIP2Q7Z417 695 aaKnown RBP23.13■■□□□ 1.29
COL13A1-210ENST00000517713 ZNF100Q8IYN0 542 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 TMEM59Q9BXS4 323 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 SELENOIQ9C0D9 397 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 GHRLQ9UBU3 117 aa23.13■■□□□ 1.29
COL13A1-210ENST00000517713 A0A096LPE4 126 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 A0A0A6YYD4 124 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 A0A1W2PPZ6 126 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 SMLR1H3BR10 107 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 CRTAPO75718 401 aaPredicted RBP23.12■■□□□ 1.29
COL13A1-210ENST00000517713 SULT1A3P0DMM9 295 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 SULT1A4P0DMN0 295 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 GNB3P16520 340 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 ANXA7P20073 488 aaKnown RBP23.12■■□□□ 1.29
COL13A1-210ENST00000517713 ALDH3B1P43353 468 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 FOXG1P55316 489 aaPredicted RBP23.12■■□□□ 1.29
COL13A1-210ENST00000517713 TRAPPC6BQ86SZ2 158 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 ZNF584Q8IVC4 421 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 CPEB3Q8NE35 698 aaKnown RBP23.12■■□□□ 1.29
COL13A1-210ENST00000517713 OR5D18Q8NGL1 313 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 MED30Q96HR3 178 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 TRAF4Q9BUZ4 470 aaPredicted RBP23.12■■□□□ 1.29
COL13A1-210ENST00000517713 ING4Q9UNL4 249 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 ZNF407Q9C0G0 2248 aa23.12■■□□□ 1.29
COL13A1-210ENST00000517713 PYCARD-AS1I3L0S3 204 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 TM4SF5O14894 197 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 CXCL3P19876 107 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 FAPQ12884 760 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 FAM189A2Q15884 450 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 SLC22A6Q4U2R8 563 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 PIAS4Q8N2W9 510 aaPredicted RBP23.11■■□□□ 1.29
COL13A1-210ENST00000517713 PIGTQ969N2 578 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 RGCCQ9H4X1 137 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 GPR173Q9NS66 373 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 A0A1W2PP11 408 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 ZNF736B4DX44 427 aaPredicted RBP23.11■■□□□ 1.29
COL13A1-210ENST00000517713 IL5P05113 134 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 NAT2P11245 290 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 SEC22CQ9BRL7 303 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 ATPIF1Q9UII2 106 aa23.11■■□□□ 1.29
COL13A1-210ENST00000517713 ANXA3P12429 323 aa23.1■■□□□ 1.29
COL13A1-210ENST00000517713 ZNF24P17028 368 aa23.1■■□□□ 1.29
COL13A1-210ENST00000517713 TNK1Q13470 666 aa23.1■■□□□ 1.29
COL13A1-210ENST00000517713 C1QL2Q7Z5L3 287 aa23.1■■□□□ 1.29
COL13A1-210ENST00000517713 TNFAIP8L1Q8WVP5 186 aa23.1■■□□□ 1.29
COL13A1-210ENST00000517713 URM1Q9BTM9 101 aaKnown RBP23.1■■□□□ 1.29
COL13A1-210ENST00000517713 CST11Q9H112 138 aa23.1■■□□□ 1.29
COL13A1-210ENST00000517713 NPDC1Q9NQX5 325 aaPredicted RBP23.1■■□□□ 1.29
COL13A1-210ENST00000517713 M0QYG6 137 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 CD74P04233 296 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 CDK10Q15131 360 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 NUDCD2Q8WVJ2 157 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 TINAGL1Q9GZM7 467 aaPredicted RBP23.09■■□□□ 1.29
COL13A1-210ENST00000517713 GPN1Q9HCN4 374 aaPredicted RBP23.09■■□□□ 1.29
COL13A1-210ENST00000517713 B3GNT2Q9NY97 397 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 BOLA1Q9Y3E2 137 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 SLC22A20A6NK97 555 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 SOCS1O15524 211 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 FABP7O15540 132 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 CLN3Q13286 438 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 DEFB109BQ30KR1 87 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 OR56B1Q8NGI3 324 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 RAB3CQ96E17 227 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 C1QTNF5Q9BXJ0 243 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 PRDM14Q9GZV8 571 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 DLL3Q9NYJ7 618 aa23.09■■□□□ 1.29
COL13A1-210ENST00000517713 SPSB1Q96BD6 273 aa23.08■■□□□ 1.29
COL13A1-210ENST00000517713 S100A13Q99584 98 aa23.08■■□□□ 1.29
COL13A1-210ENST00000517713 PLSCR3Q9NRY6 295 aa23.08■■□□□ 1.29
COL13A1-210ENST00000517713 ZNF891A8MT65 544 aaPredicted RBP23.08■■□□□ 1.28
COL13A1-210ENST00000517713 HLA-HP01893 362 aa23.08■■□□□ 1.28
COL13A1-210ENST00000517713 AMY2AP04746 511 aa23.08■■□□□ 1.28
COL13A1-210ENST00000517713 RLN1P04808 185 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms