RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 DIMT1Q9UNQ2 313 aaKnown RBP12.08□□□□□ -0.48
NUP54-216ENST00000514901 PPP1R3CQ9UQK1 317 aa12.08□□□□□ -0.48
NUP54-216ENST00000514901 EXOSC1Q9Y3B2 195 aaKnown RBP12.08□□□□□ -0.48
NUP54-216ENST00000514901 MTORP42345 2549 aa12.08□□□□□ -0.48
NUP54-216ENST00000514901 TLN2Q9Y4G6 2542 aa12.08□□□□□ -0.48
NUP54-216ENST00000514901 TEP1Q99973 2627 aaKnown RBP12.07□□□□□ -0.48
NUP54-216ENST00000514901 DYSFO75923 2080 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 ZNF816-ZNF321PA0A0X1KG74 233 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 ANXA2P2A6NMY6 339 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 DHRS3O75911 302 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
NUP54-216ENST00000514901 HTR1AP08908 422 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 ZNF12P17014 697 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 MYF6P23409 242 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 ACKR3P25106 362 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 CCR9P51686 369 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 GBX2P52951 348 aaPredicted RBP12.07□□□□□ -0.48
NUP54-216ENST00000514901 MAB21L1Q13394 359 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 ZNF181Q2M3W8 571 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 Q6ZSR3 168 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 DOK3Q7L591 496 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 BIVMQ86UB2 503 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 CIARTQ8N365 385 aaPredicted RBP12.07□□□□□ -0.48
NUP54-216ENST00000514901 BPIFB6Q8NFQ5 453 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 OR2G2Q8NGZ5 317 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 OR8S1Q8NH09 359 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 PPP1R14AQ96A00 147 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 PELI1Q96FA3 418 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 FAM71F1Q96KD3 344 aaPredicted RBP12.07□□□□□ -0.48
NUP54-216ENST00000514901 PAPOLGQ9BWT3 736 aaKnown RBP12.07□□□□□ -0.48
NUP54-216ENST00000514901 ANKRD60Q9BZ19 345 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 GCM1Q9NP62 436 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 TMEM106BQ9NUM4 274 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 SCN3BQ9NY72 215 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 PSORS1C1Q9UIG5 152 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 ENPP5Q9UJA9 477 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 RAB26Q9ULW5 256 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 SLC22A13Q9Y226 551 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 CAB39Q9Y376 341 aaPredicted RBP12.07□□□□□ -0.48
NUP54-216ENST00000514901 RHBDD3Q9Y3P4 386 aa12.07□□□□□ -0.48
NUP54-216ENST00000514901 ZANQ9Y493 2812 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 A0A096LNT2 108 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 A0A1B0GVI7 797 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 LRRC30A6NM36 301 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 SMAD7O15105 426 aaKnown RBP12.06□□□□□ -0.48
NUP54-216ENST00000514901 UBCP0CG48 685 aaKnown RBP12.06□□□□□ -0.48
NUP54-216ENST00000514901 LIMS3P0CW19 117 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 LIMS4P0CW20 117 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 CCL1P22362 96 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 PSMB10P40306 273 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 CHN2P52757 468 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 ST3GAL4Q11206 333 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 SPRNQ5BIV9 151 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 WDR38Q5JTN6 314 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 C6orf141Q5SZD1 244 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 TMEM244Q5VVB8 128 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 LAIR2Q6ISS4 152 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 PIGCQ92535 297 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 HPS1Q92902 700 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 HIST1H2AAQ96QV6 131 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 MICU1Q9BPX6 476 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 RASSF4Q9H2L5 321 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 FN3KRPQ9HA64 309 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 PIGLQ9Y2B2 252 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 V9GYS6 101 aa12.06□□□□□ -0.48
NUP54-216ENST00000514901 A0A1B0GTI1 187 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 P2RY10O00398 339 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 SYT7O43581 403 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 ISG15P05161 165 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 HEXAP06865 529 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 CCDC159P0C7I6 412 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 IRF2P14316 349 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 TGM4P49221 684 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 PRDX4Q13162 271 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 ALKBH1Q13686 389 aaKnown RBP12.05□□□□□ -0.48
NUP54-216ENST00000514901 MOGAT3Q86VF5 341 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 C1orf87Q8N0U7 546 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 PRSS35Q8N3Z0 413 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 STX19Q8N4C7 294 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 KLHL36Q8N4N3 616 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 OR11L1Q8NGX0 322 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 OR14K1Q8NGZ2 314 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 Q8TCH9 128 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 RNF166Q96A37 237 aaPredicted RBP12.05□□□□□ -0.48
NUP54-216ENST00000514901 C10orf35Q96D05 121 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 SOX7Q9BT81 388 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 Q9H521 79 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 ISG20L2Q9H9L3 353 aaKnown RBP12.05□□□□□ -0.48
NUP54-216ENST00000514901 TREM2Q9NZC2 230 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 FRRS1LQ9P0K9 344 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 NPTNQ9Y639 398 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 CACNG2Q9Y698 323 aa12.05□□□□□ -0.48
NUP54-216ENST00000514901 IGHV4-61A0A0C4DH41 118 aa12.04□□□□□ -0.48
NUP54-216ENST00000514901 TMEM210A6NLX4 147 aa12.04□□□□□ -0.48
NUP54-216ENST00000514901 ZNF850A8MQ14 1090 aa12.04□□□□□ -0.48
NUP54-216ENST00000514901 TMEM178BH3BS89 294 aa12.04□□□□□ -0.48
NUP54-216ENST00000514901 XPNPEP2O43895 674 aa12.04□□□□□ -0.48
NUP54-216ENST00000514901 FSTL3O95633 263 aa12.04□□□□□ -0.48
NUP54-216ENST00000514901 KIR3DL2P43630 455 aa12.04□□□□□ -0.48
NUP54-216ENST00000514901 ETV1P50549 477 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms