RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 OR4C13Q8NGP0 309 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 LMO3Q8TAP4 145 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 PCNPQ8WW12 178 aaKnown RBP3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 CLDN23Q96B33 292 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 ZMYND19Q96E35 227 aaPredicted RBP3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 CPNE2Q96FN4 548 aaPredicted RBP3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 MED8Q96G25 268 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 TMEM80Q96HE8 168 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 SFRP2Q96HF1 295 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 MAGEB18Q96M61 343 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 GPR21Q99679 349 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 MCHR1Q99705 422 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 ACTR6Q9GZN1 396 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 ALX4Q9H161 411 aaPredicted RBP3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 BOLA2Q9H3K6 86 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 RNF167Q9H6Y7 350 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 TMEM9BQ9NQ34 198 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 DDIT4Q9NX09 232 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 KLK11Q9UBX7 282 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 SLC2A6Q9UGQ3 507 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 MLXQ9UH92 298 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 C14orf166Q9Y224 244 aaKnown RBP3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 MRPS18CQ9Y3D5 142 aaKnown RBP3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 TMEM56-RWDD3S4R434 201 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 ARHGEF10O15013 1369 aa3.47□□□□□ -1.85
SMARCA5-202ENST00000508573 USP6P35125 1406 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 RIMS2Q9UQ26 1411 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 IGHV2OR16-5A0A0B4J2B6 119 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 DHRS7CA6NNS2 312 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 CEACAM18A8MTB9 384 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 MIF4GDA9UHW6 222 aaKnown RBP3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 LINC00587B1AMM8 73 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 F6UB75 175 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 NPIPB9F8W1W9 429 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 M0QZK8 103 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 TAAR5O14804 337 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 EIF3GO75821 320 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 SLC2A10O95528 541 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 PMS2P2O95744 297 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 HPNP05981 417 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 RBMY1CP0DJD4 496 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 PGA4P0DJD7 388 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 PGA3P0DJD8 388 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 LIFP15018 202 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 TAC1P20366 129 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 HTR1EP28566 365 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 PYCR1P32322 319 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 SULT1A1P50225 295 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 SULT1A2P50226 295 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 APOC4P55056 127 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 RAB38P57729 211 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 OR12D2P58182 307 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 SNRPD1P62314 119 aaKnown RBP3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 FMODQ06828 376 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 LTB4RQ15722 352 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 NSUN5P1Q3KNT7 163 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 C8orf82Q6P1X6 216 aaPredicted RBP3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 CYHR1Q6ZMK1 362 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 RBM23Q86U06 439 aaKnown RBP3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 ZNF676Q8N7Q3 588 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 ARIH2OSQ8N7S6 290 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 OR13D1Q8NGV5 346 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 RFESDQ8TAC1 157 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 Q8WTZ3 238 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 YIPF5Q969M3 257 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 TCEAL4Q96EI5 215 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 DUX3Q96PT4 197 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 SEC22CQ9BRL7 303 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 MED18Q9BUE0 208 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 YTHDF1Q9BYJ9 559 aaKnown RBP3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 OR51J1Q9H342 316 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 OR51I1Q9H343 314 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 ZNF442Q9H7R0 627 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 IL1RAPQ9NPH3 570 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 TMEM181Q9P2C4 612 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 ZNF225Q9UK10 706 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 SLC7A11Q9UPY5 501 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 UBIAD1Q9Y5Z9 338 aa3.46□□□□□ -1.86
SMARCA5-202ENST00000508573 FAM240AA0A1B0GVK7 77 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 A0A1W2PRG6 482 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 OR6C6A6NF89 314 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 IGLON5A6NGN9 336 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 ZNF98A6NK75 572 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 C15orf61A6NNL5 157 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 OR11H12B2RN74 326 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 F5H5K5 113 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 TNFRSF11BO00300 401 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 UGT2B11O75310 529 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 FRAT2O75474 233 aaPredicted RBP3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 SCRG1O75711 98 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 CNMDO75829 334 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 OR2B3O76000 313 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 HPRT1P00492 218 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 NGFP01138 241 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 IGHV3-9P01782 118 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 IGHV4-39P01824 125 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 PGA5P0DJD9 388 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 ADRB3P13945 408 aa3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 WARSP23381 471 aaKnown RBP3.45□□□□□ -1.86
SMARCA5-202ENST00000508573 CEACAM8P31997 349 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms