RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 OR52W1Q6IF63 320 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 GLIPR1L1Q6UWM5 242 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 Q6ZRG5 221 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 H1FNTQ75WM6 255 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 DOK3Q7L591 496 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 C1QL4Q86Z23 238 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CARFQ8N187 725 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 GVQW1Q8N7I0 195 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 LINC00469Q8N7U9 141 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 C12orf76Q8N812 135 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 UBAC2Q8NBM4 344 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 ADPRHL1Q8NDY3 354 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR52N4Q8NGI2 321 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 LYPD6BQ8NI32 183 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 NANPQ8TBE9 248 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 C2CD4CQ8TF44 421 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 PTPMT1Q8WUK0 201 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC25A43Q8WUT9 341 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 ASB10Q8WXI3 467 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 FGF14Q92915 247 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 HIST1H2BAQ96A08 127 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 MRGPRFQ96AM1 343 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLAMF6Q96DU3 332 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 RRNAD1Q96FB5 475 aaKnown RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 GAL3ST4Q96RP7 486 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 GPER1Q99527 375 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR8D2Q9GZM6 311 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR10A2Q9H208 303 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 C5orf66Q9H5L9 145 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 OPA3Q9H6K4 179 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM231Q9H6L2 316 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 LMAN1LQ9HAT1 526 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 SEBOXQ9HB31 216 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 FAM60AQ9NP50 221 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 ACKR4Q9NPB9 350 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CHST11Q9NPF2 352 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 KCNJ16Q9NPI9 418 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 OR2S2Q9NQN1 319 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CENPMQ9NSP4 180 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CACFD1Q9UGQ2 172 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 TUBD1Q9UJT1 453 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 POLR1DQ9Y2S0 133 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 KCNIP3Q9Y2W7 256 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 NSG2Q9Y328 171 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 RHBDD3Q9Y3P4 386 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 PCDHGA1Q9Y5H4 931 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CLDN16Q9Y5I7 305 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 SNRNP200O75643 2136 aaKnown RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 TICRRQ7Z2Z1 1910 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CACNA1IQ9P0X4 2223 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 IGKV3D-11A0A0A0MRZ8 115 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 PIGBOS1A0A0B4J2F0 54 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 C7orf77A4D0Y5 90 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ANKUB1A6NFN9 424 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 TLCD2A6NGC4 264 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 VSTM2BA6NLU5 285 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 METTL12A8MUP2 240 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 H0YIZ8 118 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 M0R036 132 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 TGOLN2O43493 480 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 TLX3O43711 291 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 GMFGO60234 142 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 GPR137BO60478 399 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 EIF1BO60739 113 aaKnown RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF217O75362 1048 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 DEDDO75618 318 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 CRTAPO75718 401 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 F10P00742 488 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 TTRP02766 147 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 IGKV3-11P04433 115 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 CTSDP07339 412 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 HCKP08631 526 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 HKR1P10072 659 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 DRD1P21728 446 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 CCL1P22362 96 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 NFYBP25208 207 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 FKBP2P26885 142 aaKnown RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 LAP3P28838 519 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 S100A2P29034 98 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 FCGR2CP31995 323 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 MAS1LP35410 378 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 EIF1P41567 113 aaKnown RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ALDH3B1P43353 468 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 CAPZBP47756 277 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 CAMLGP49069 296 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF84P51523 738 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF133P52736 654 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 SNU13P55769 128 aaKnown RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 UCP2P55851 309 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 POLR2GP62487 172 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 GRB2P62993 217 aaKnown RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 CSNK2A1P68400 391 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 SRPXP78539 464 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 SRSF3P84103 164 aaKnown RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 TLE3Q04726 772 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 RAB32Q13637 225 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 IL13RA2Q14627 380 aa4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 EBPQ15125 230 aaKnown RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 SMAD2Q15796 467 aaKnown RBP4.39□□□□□ -1.71
HMGB3P16-201ENST00000508037 IAH1Q2TAA2 248 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 318.3 ms