RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 METTL17Q9H7H0 456 aaPredicted RBP12.91□□□□□ -0.34
NUP50-219ENST00000497960 NIPAL2Q9H841 368 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 SP140LQ9H930 580 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 BRD7Q9NPI1 651 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 G6PC2Q9NQR9 355 aa12.91□□□□□ -0.34
NUP50-219ENST00000497960 IGHV3-64DA0A0J9YX35 117 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 EFCAB10A6NFE3 127 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 J3QLI3 93 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 SLC1A7O00341 560 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 TBX1O43435 398 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 XPNPEP2O43895 674 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 SLC2A1P11166 492 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 IRF2P14316 349 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 GATA3P23771 443 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 PSMA6P60900 246 aaKnown RBP12.9□□□□□ -0.34
NUP50-219ENST00000497960 ACTA2P62736 377 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 ACTG2P63267 376 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 LCN2P80188 198 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 ZNF85Q03923 595 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 ZNF92Q03936 586 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 ZNF829Q3KNS6 432 aaPredicted RBP12.9□□□□□ -0.34
NUP50-219ENST00000497960 GLYATL3Q5SZD4 288 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 DEGS2Q6QHC5 323 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 AHSA2Q719I0 299 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 MOGAT3Q86VF5 341 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 ZNF679Q8IYX0 411 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 C1orf87Q8N0U7 546 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 ACBD7Q8N6N7 88 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 CELF2-AS1Q8N7Q2 184 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 YIPF7Q8N8F6 280 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 OR2AE1Q8NHA4 323 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 ZNF420Q8TAQ5 688 aaPredicted RBP12.9□□□□□ -0.34
NUP50-219ENST00000497960 SIGLEC11Q96RL6 698 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 MYCBPQ99417 103 aaPredicted RBP12.9□□□□□ -0.34
NUP50-219ENST00000497960 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
NUP50-219ENST00000497960 OPA3Q9H6K4 179 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 PATZ1Q9HBE1 687 aaKnown RBP12.9□□□□□ -0.34
NUP50-219ENST00000497960 INPP5EQ9NRR6 644 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 MRPS18AQ9NVS2 196 aaKnown RBP12.9□□□□□ -0.34
NUP50-219ENST00000497960 GTF2A1LQ9UNN4 478 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 MYRFQ9Y2G1 1151 aa12.9□□□□□ -0.34
NUP50-219ENST00000497960 A0A1B0GWJ7 208 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 J3QRE1 110 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 XRCC2O43543 280 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 TCF21O43680 179 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 ZNF254O75437 659 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 IGHA1P01876 353 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 PIPP12273 146 aaPredicted RBP12.89□□□□□ -0.35
NUP50-219ENST00000497960 ZNF121P58317 390 aaPredicted RBP12.89□□□□□ -0.35
NUP50-219ENST00000497960 ROM1Q03395 351 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 MED21Q13503 144 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 OR8G1Q15617 311 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 C6orf141Q5SZD1 244 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 LAIR2Q6ISS4 152 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 PLEKHG7Q6ZR37 379 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 FAM57BQ71RH2 274 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 OR11L1Q8NGX0 322 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 ERGIC1Q969X5 290 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 PGAM5Q96HS1 289 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 ALG8Q9BVK2 526 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 FGF20Q9NP95 211 aaPredicted RBP12.89□□□□□ -0.35
NUP50-219ENST00000497960 SCN3BQ9NY72 215 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 CNOT2Q9NZN8 540 aaKnown RBP12.89□□□□□ -0.35
NUP50-219ENST00000497960 MRM2Q9UI43 246 aaKnown RBP12.89□□□□□ -0.35
NUP50-219ENST00000497960 GNG8Q9UK08 70 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 ARHGAP32A7KAX9 2087 aa12.89□□□□□ -0.35
NUP50-219ENST00000497960 STAB1Q9NY15 2570 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 METTL15A6NJ78 407 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 MAGEB4O15481 346 aaPredicted RBP12.88□□□□□ -0.35
NUP50-219ENST00000497960 GMDSO60547 372 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 CYB5R3P00387 301 aaPredicted RBP12.88□□□□□ -0.35
NUP50-219ENST00000497960 MYL12AP19105 171 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 CA6P23280 308 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 RBMXP38159 391 aaKnown RBP12.88□□□□□ -0.35
NUP50-219ENST00000497960 CD200P41217 278 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 GATA4P43694 442 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 GALEQ14376 348 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 GFOD2Q3B7J2 385 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 TP53I3Q53FA7 332 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 STX19Q8N4C7 294 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 GGHQ92820 318 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 C7orf69Q9H7B7 122 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 PLCXD1Q9NUJ7 323 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 ACOXLQ9NUZ1 547 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 MRPL15Q9P015 296 aaKnown RBP12.88□□□□□ -0.35
NUP50-219ENST00000497960 EXOSC1Q9Y3B2 195 aaKnown RBP12.88□□□□□ -0.35
NUP50-219ENST00000497960 FBN1P35555 2871 aaKnown RBP12.88□□□□□ -0.35
NUP50-219ENST00000497960 MXRA5Q9NR99 2828 aa12.88□□□□□ -0.35
NUP50-219ENST00000497960 PPIAL4EA0A075B759 164 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 LOC105371242A0A075B767 164 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 PPIAL4CA0A0B4J2A2 164 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.87□□□□□ -0.35
NUP50-219ENST00000497960 C5orf63A6NC05 138 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 PPIAL4DF5H284 164 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 LOC110117498-PIK3R3F6TDL0 507 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 SULT1C4O75897 302 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 RPP14O95059 124 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms