RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CLCF1Q9UBD9 225 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 ANAPC10Q9UM13 185 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 FLVCR2Q9UPI3 526 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 PIGLQ9Y2B2 252 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 ZNF175Q9Y473 711 aa9.28□□□□□ -0.92
CLCN6-208ENST00000494028 CNOT1A5YKK6 2376 aaKnown RBP9.28□□□□□ -0.92
CLCN6-208ENST00000494028 A0A1W2PP11 408 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 METTL21EPA6NDL7 271 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 MTRF1O75570 445 aaKnown RBP9.27□□□□□ -0.93
CLCN6-208ENST00000494028 MPIG6BO95866 241 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 TGM6O95932 706 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 YES1P07947 543 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 ALDH3B1P43353 468 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 TAS2R19P59542 299 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 C9orf135Q5VTT2 229 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 CD276Q5ZPR3 534 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 STEAP1BQ6NZ63 245 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 NOXA1Q86UR1 476 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 FJX1Q86VR8 437 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 ANGPTL5Q86XS5 388 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 MCEMP1Q8IX19 187 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 ZNF100Q8IYN0 542 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 ZNF101Q8IZC7 436 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 TMEM229BQ8NBD8 167 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 SEMA6DQ8NFY4 1073 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 OR5D18Q8NGL1 313 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 NUDCD2Q8WVJ2 157 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 PIGTQ969N2 578 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 TRAF4Q9BUZ4 470 aaPredicted RBP9.27□□□□□ -0.93
CLCN6-208ENST00000494028 TMEM59Q9BXS4 323 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 ACTR6Q9GZN1 396 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 PRDM14Q9GZV8 571 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 MED28Q9H204 178 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 OR10A4Q9H209 315 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 LDAHQ9H6V9 325 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 ZMAT3Q9HA38 289 aaKnown RBP9.27□□□□□ -0.93
CLCN6-208ENST00000494028 GPR173Q9NS66 373 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 NKIRAS2Q9NYR9 191 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 PRSS50Q9UI38 385 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 ZNF107Q9UII5 783 aaPredicted RBP9.27□□□□□ -0.93
CLCN6-208ENST00000494028 ZNF391Q9UJN7 358 aa9.27□□□□□ -0.93
CLCN6-208ENST00000494028 TRAV17A0A0B4J275 112 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 SLC22A20A6NK97 555 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 FOXI3A8MTJ6 420 aaPredicted RBP9.26□□□□□ -0.93
CLCN6-208ENST00000494028 MFNGO00587 321 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 XRCC2O43543 280 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 SSX5O60225 188 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 SS18L1O75177 396 aaPredicted RBP9.26□□□□□ -0.93
CLCN6-208ENST00000494028 C1QBP02746 253 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 LCATP04180 440 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 CD74P04233 296 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 CD3DP04234 171 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 FCER2P06734 321 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 MELTFP08582 738 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 SULT1A3P0DMM9 295 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 SULT1A4P0DMN0 295 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 COX5BP10606 129 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 NAT2P11245 290 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 FCGR2AP12318 317 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 RAD52P43351 418 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 GSK3AP49840 483 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 PRSS12P56730 875 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 ZP1P60852 638 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 MAB21L1Q13394 359 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 RBMS2Q15434 407 aaKnown RBP9.26□□□□□ -0.93
CLCN6-208ENST00000494028 OR8B8Q15620 311 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 KISS1Q15726 138 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 DEFB109BQ30KR1 87 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 TMEM42Q69YG0 159 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 SEZ6L2Q6UXD5 910 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 COLCA1Q6ZS62 124 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 TRAPPC6BQ86SZ2 158 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 PNLDC1Q8NA58 520 aaKnown RBP9.26□□□□□ -0.93
CLCN6-208ENST00000494028 OR10R2Q8NGX6 335 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 TNFAIP8L1Q8WVP5 186 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 SPSB1Q96BD6 273 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 CYYR1Q96J86 154 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 GPER1Q99527 375 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 SEC22CQ9BRL7 303 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 C1QTNF5Q9BXJ0 243 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 RGCCQ9H4X1 137 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 BANF2Q9H503 90 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 BEX1Q9HBH7 125 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 GP6Q9HCN6 339 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 ING3Q9NXR8 418 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 MYO7BQ6PIF6 2116 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 DOCK7Q96N67 2140 aa9.26□□□□□ -0.93
CLCN6-208ENST00000494028 A0A096LPE4 126 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 A0A1W2PPZ6 126 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 SMLR1H3BR10 107 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 M0QYG6 137 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 ICMTO60725 284 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 RAB3DO95716 219 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 HLA-HP01893 362 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 HPXP02790 462 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 IL5P05113 134 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 ZNF735P0CB33 412 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 VSIG10L2P0DP72 767 aa9.25□□□□□ -0.93
CLCN6-208ENST00000494028 ANXA3P12429 323 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms