RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 ALOX5APP20292 161 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 CD34P28906 385 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 PSMB10P40306 273 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 CX3CR1P49238 355 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 POU3F4P49335 361 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 NR0B1P51843 470 aaKnown RBP9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 PPIAP62937 165 aaKnown RBP9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 SORDQ00796 357 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 PSG6Q00889 435 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 ZNF74Q16587 644 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 ELOA3BQ3SY89 546 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 DEFB134Q4QY38 66 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 ACTBL2Q562R1 376 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 TEX30Q5JUR7 227 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 EEF1A1P5Q5VTE0 462 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 DHRS7BQ6IAN0 325 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 EIF5AL1Q6IS14 154 aaKnown RBP9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 FBXO42Q6P3S6 717 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 ADGRE4PQ86SQ3 457 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 SYT9Q86SS6 491 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 CXorf67Q86X51 503 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 CA13Q8N1Q1 262 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 INO80EQ8NBZ0 244 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 STEAP2Q8NFT2 490 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 ELOA3Q8NG57 546 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 OR1M1Q8NGA1 313 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 OR51S1Q8NGJ8 323 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 THAP6Q8TBB0 222 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 STK35Q8TDR2 534 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 FAM222BQ8WU58 562 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 TMEM158Q8WZ71 300 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 TMEM106AQ96A25 262 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 FAM3DQ96BQ1 224 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 C3orf49Q96BT1 292 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 SAT2Q96F10 170 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 NARS2Q96I59 477 aaKnown RBP9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 VSTM2LQ96N03 204 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 OR1F2PQ96R84 312 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 NMNAT3Q96T66 252 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 PHB2Q99623 299 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 FBLN5Q9UBX5 448 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 PRODH2Q9UF12 536 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 FBXL2Q9UKC9 423 aa9.35□□□□□ -0.91
PDLIM1-205ENST00000493949 MEGF8Q7Z7M0 2845 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 TMEM272A0A1B0GTI8 110 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 LOC390937A0A1W2PQ73 354 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 TMEM218A2RU14 115 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 SYNDIG1LA6NDD5 238 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 NME2P1O60361 137 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 OR10H2O60403 315 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 SPDEFO95238 335 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 MT-ATP6P00846 226 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 CSTAP01040 98 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 ISG15P05161 165 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 ASAH2BP0C7U1 165 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 OR8G3PP0DMU2 310 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 FBLP22087 321 aaKnown RBP9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 NME2P22392 152 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 HMGN3Q15651 99 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 STK11Q15831 433 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 GUCA2BQ16661 112 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 HFEQ30201 348 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 ALG10Q5BKT4 473 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 LY6G6FQ5SQ64 297 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 C1orf100Q5SVJ3 147 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 NSUN5P2Q63ZY6 315 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 FIGNL1Q6PIW4 674 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 DEGS2Q6QHC5 323 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 PRSS57Q6UWY2 283 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 LANCL3Q6ZV70 420 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 LYG2Q86SG7 212 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 ATG4DQ86TL0 474 aaPredicted RBP9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 SLC25A42Q86VD7 318 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 SERPINA12Q8IW75 414 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 LRRC75A-AS1Q8N1F1 130 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 SLC30A7Q8NEW0 376 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 OR52R1Q8NGF1 315 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 OTOSQ8NHW6 89 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 RNF128Q8TEB7 428 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 MITD1Q8WV92 249 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 MVB12AQ96EY5 273 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 OR8B4Q96RC9 309 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 PDCD10Q9BUL8 212 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 NMES1Q9C002 83 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 POFUT1Q9H488 388 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 TMEM100Q9NV29 134 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 GRHPRQ9UBQ7 328 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 MLXQ9UH92 298 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 FBXO9Q9UK97 447 aaPredicted RBP9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 MRTO4Q9UKD2 239 aaKnown RBP9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 FREM3P0C091 2139 aa9.34□□□□□ -0.91
PDLIM1-205ENST00000493949 TRAV18A0A075B6X5 111 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 TEX13DA0A0J9YY54 714 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 TMEM72A0PK05 275 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 METTL21EPA6NDL7 271 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF98A6NK75 572 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 FAM25EA8MYX2 175 aa9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 ZNF736B4DX44 427 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1-205ENST00000493949 KDM4BO94953 1096 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms