RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ERGIC1Q969X5 290 aa14.79□□□□□ -0.04
ERCC3-207ENST00000490062 YTHDF1Q9BYJ9 559 aaKnown RBP14.79□□□□□ -0.04
ERCC3-207ENST00000490062 CHODLQ9H9P2 273 aa14.79□□□□□ -0.04
ERCC3-207ENST00000490062 DECR2Q9NUI1 292 aa14.79□□□□□ -0.04
ERCC3-207ENST00000490062 PAK1IP1Q9NWT1 392 aaPredicted RBP14.79□□□□□ -0.04
ERCC3-207ENST00000490062 BABAM2Q9NXR7 383 aa14.79□□□□□ -0.04
ERCC3-207ENST00000490062 CLEC2DQ9UHP7 191 aa14.79□□□□□ -0.04
ERCC3-207ENST00000490062 ITGB1BP2Q9UKP3 347 aa14.79□□□□□ -0.04
ERCC3-207ENST00000490062 BLOC1S6Q9UL45 172 aa14.79□□□□□ -0.04
ERCC3-207ENST00000490062 ZNF816-ZNF321PA0A0X1KG74 233 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 IFNL4K9M1U5 179 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 LY6HO94772 140 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 PSMB10P40306 273 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 SRP9P49458 86 aaKnown RBP14.78□□□□□ -0.04
ERCC3-207ENST00000490062 TMEM33P57088 247 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 MZT1Q08AG7 82 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 RIPPLY1Q0D2K3 151 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 RIN1Q13671 783 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 ZNF181Q2M3W8 571 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 GFOD2Q3B7J2 385 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 OR2G6Q5TZ20 316 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 RPL22L1Q6P5R6 122 aaKnown RBP14.78□□□□□ -0.04
ERCC3-207ENST00000490062 NANOGP1Q8N7R0 232 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 FAM168AQ92567 244 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 MEGF10Q96KG7 1140 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 UBAP1Q9NZ09 502 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 ITPR3Q14573 2671 aa14.78□□□□□ -0.04
ERCC3-207ENST00000490062 IGHV1-69-2A0A0G2JMI3 117 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 TMEM212A6NML5 194 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 E9PI62 339 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 H0YL77 283 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 P2RY10O00398 339 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 OGG1O15527 345 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 MRPS14O60783 128 aaKnown RBP14.77□□□□□ -0.05
ERCC3-207ENST00000490062 SLC25A16P16260 332 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 CA6P23280 308 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 BDH1Q02338 343 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 ACSM1Q08AH1 577 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 MAB21L1Q13394 359 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 CDK5R1Q15078 307 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 TSTQ16762 297 aaKnown RBP14.77□□□□□ -0.05
ERCC3-207ENST00000490062 PRSS48Q7RTY5 328 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 Q8TCH9 128 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 YIPF5Q969M3 257 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 ITPKCQ96DU7 683 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 Q96MF0 132 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 OR2V2Q96R30 315 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 ADAT1Q9BUB4 502 aaKnown RBP14.77□□□□□ -0.05
ERCC3-207ENST00000490062 GTF2A1LQ9UNN4 478 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 RHBDD3Q9Y3P4 386 aa14.77□□□□□ -0.05
ERCC3-207ENST00000490062 A0A096LNT2 108 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.76□□□□□ -0.05
ERCC3-207ENST00000490062 A0A1B0GVI7 797 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 LOC107986453A0A1B0GWG9 222 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 PTGES3LE9PB15 166 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 SYT7O43581 403 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 FSTL3O95633 263 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 HLA-DPB1P04440 258 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 CD1AP06126 327 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 COL8A2P25067 703 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 WNT4P56705 351 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 TAS2R43P59537 309 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 GABARAPL2P60520 117 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 OR8G1Q15617 311 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 FAM76BQ5HYJ3 339 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 OR10AD1Q8NGE0 317 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 ITLN1Q8WWA0 313 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 FAM71F1Q96KD3 344 aaPredicted RBP14.76□□□□□ -0.05
ERCC3-207ENST00000490062 TRIM36Q9NQ86 728 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 ENPP5Q9UJA9 477 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 HHLA2Q9UM44 414 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 ERGIC3Q9Y282 383 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 LRRC42Q9Y546 428 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 VPS13CQ709C8 3753 aa14.76□□□□□ -0.05
ERCC3-207ENST00000490062 F5H5P2 479 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 MYL12BO14950 172 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 RGS10O43665 173 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 ZFPL1O95159 310 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 GNALP38405 381 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 SLC3A1Q07837 685 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 SPRNQ5BIV9 151 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 DMKNQ6E0U4 476 aaPredicted RBP14.75□□□□□ -0.05
ERCC3-207ENST00000490062 COMMD2Q86X83 199 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 OR5P3Q8WZ94 311 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 SMIM19Q96E16 107 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 PAPOLGQ9BWT3 736 aaKnown RBP14.75□□□□□ -0.05
ERCC3-207ENST00000490062 MND1Q9BWT6 205 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 TLNRD1Q9H1K6 362 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 GCM1Q9NP62 436 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 C14orf119Q9NWQ9 140 aa14.75□□□□□ -0.05
ERCC3-207ENST00000490062 LSM2Q9Y333 95 aaKnown RBP14.75□□□□□ -0.05
ERCC3-207ENST00000490062 IGHV4-30-2A0A087WSY4 118 aa14.74□□□□□ -0.05
ERCC3-207ENST00000490062 TRIM64A6NGJ6 449 aa14.74□□□□□ -0.05
ERCC3-207ENST00000490062 ANXA2P2A6NMY6 339 aa14.74□□□□□ -0.05
ERCC3-207ENST00000490062 LALBAP00709 142 aa14.74□□□□□ -0.05
ERCC3-207ENST00000490062 CDH15P55291 814 aa14.74□□□□□ -0.05
ERCC3-207ENST00000490062 PRDX4Q13162 271 aa14.74□□□□□ -0.05
ERCC3-207ENST00000490062 HFEQ30201 348 aa14.74□□□□□ -0.05
ERCC3-207ENST00000490062 CLVS2Q5SYC1 327 aa14.74□□□□□ -0.05
ERCC3-207ENST00000490062 XAF1Q6GPH4 301 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms