RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 CD276Q5ZPR3 534 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 KCTD18Q6PI47 426 aaPredicted RBP15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 C12orf54Q6X4T0 127 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 WDR86Q86TI4 376 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 GALNT4Q8N4A0 578 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 SIGLECL1Q8N7X8 197 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 PAPOLGQ9BWT3 736 aaKnown RBP15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 PRRG3Q9BZD7 231 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 PPP1R3EQ9H7J1 279 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 KRT84Q9NSB2 600 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 CTSZQ9UBR2 303 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 LRP12Q9Y561 859 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 MPC1Q9Y5U8 109 aa15.32■□□□□ 0.04
PRPF40A-209ENST00000486100 TMEM89A2RUT3 159 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 ACOD1A6NK06 481 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 ADAM20O43506 726 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 PRKYO43930 277 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 MITFO75030 526 aaPredicted RBP15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 CST4P01036 141 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 ACTG1P63261 375 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 EFNB1P98172 346 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 IL5RAQ01344 420 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 LCN1P1Q5VSP4 162 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 KDM4DQ6B0I6 523 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 DOK3Q7L591 496 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 FAM90A1Q86YD7 464 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 ZDHHC13Q8IUH4 622 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 BCL6BQ8N143 479 aaPredicted RBP15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 OR8B12Q8NGG6 310 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 GCDHQ92947 438 aaPredicted RBP15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 ITPKCQ96DU7 683 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 LYZL4Q96KX0 146 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 TECTBQ96PL2 329 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 MICU1Q9BPX6 476 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 MROQ9BYG7 248 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 MS4A7Q9GZW8 240 aaPredicted RBP15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 TMEM14AQ9Y6G1 99 aa15.31■□□□□ 0.04
PRPF40A-209ENST00000486100 ANXA2P2A6NMY6 339 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 C22orf46C9J442 243 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 HAX1O00165 279 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 ENSAO43768 121 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 GYPAP02724 150 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 MRPL3P09001 348 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 IGHV4-38-2P0DP08 117 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 EGR1P18146 543 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 ACKR3P25106 362 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 DCTDP32321 178 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 CFHR2P36980 270 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 COMPP49747 757 aaPredicted RBP15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 UBA52P62987 128 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 ANK2Q01484 3957 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 SLX4IPQ5VYV7 408 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 WDR82Q6UXN9 313 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 C9orf139Q6ZV77 190 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 AMIGO2Q86SJ2 522 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 LRRC29Q8WV35 223 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 ASB17Q8WXJ9 295 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 TLNRD1Q9H1K6 362 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 ABCB9Q9NP78 766 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 H2AFY2Q9P0M6 372 aaPredicted RBP15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 KAAG1Q9UBP8 84 aa15.3■□□□□ 0.04
PRPF40A-209ENST00000486100 TMEM269A0A1B0GVZ9 245 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 ZAR1LA6NP61 321 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 ZNF850A8MQ14 1090 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 CDIPTO14735 213 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 ZNF254O75437 659 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 PLATP00750 562 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 LIPFP07098 398 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 FCGR1AP12314 374 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 MUC1P15941 1255 aaPredicted RBP15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 EPHA2P29317 976 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 CSNK2BP67870 215 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 ROM1Q03395 351 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 POU4F2Q12837 409 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 PRDX4Q13162 271 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 MICBQ29980 383 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 AADACL4Q5VUY2 407 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 MEPCEQ7L2J0 689 aaKnown RBP15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 KRT74Q7RTS7 529 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 ZNF679Q8IYX0 411 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 TCEANCQ8N8B7 351 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 TMEM163Q8TC26 289 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 LRTOMTQ8WZ04 291 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 OR5P3Q8WZ94 311 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 PIGCQ92535 297 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 ITFG2Q969R8 447 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 ZNF48Q96MX3 618 aaPredicted RBP15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 OR8B4Q96RC9 309 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 RTL8AQ9BWD3 113 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 GABARAPL1Q9H0R8 117 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 RASSF4Q9H2L5 321 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 FAM206AQ9NX38 181 aa15.29■□□□□ 0.04
PRPF40A-209ENST00000486100 IGHV3OR15-7A0A075B7D8 119 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 IGHV3OR16-10A0A075B7F0 116 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 A0A0U1RQV5 110 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 TMEM210A6NLX4 147 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 PSMD9O00233 223 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 MTNR1AP48039 350 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 FGF12P61328 243 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 C11orf91Q3C1V1 193 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms