RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 CENPAP49450 140 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 HOXA4Q00056 320 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-227ENST00000485102 ZNF92Q03936 586 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 SEC23BQ15437 767 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 OR8B8Q15620 311 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 C2orf68Q2NKX9 166 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 DRAM2Q6UX65 266 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 OR10G2Q8NGC3 310 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 MAP6Q96JE9 813 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 ADAT1Q9BUB4 502 aaKnown RBP10.72□□□□□ -0.69
HDAC6-227ENST00000485102 C9orf16Q9BUW7 83 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 VCXQ9H320 206 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 OPA3Q9H6K4 179 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 RNPEPL1Q9HAU8 725 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 PLXNB1O43157 2135 aa10.72□□□□□ -0.69
HDAC6-227ENST00000485102 OR6C68A6NDL8 312 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 TIPRLO75663 272 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 TSPAN15O95858 294 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 FBP1P09467 338 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 SLC6A6P31641 620 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 TGFBR2P37173 567 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 KPRPQ5T749 579 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-227ENST00000485102 C1orf122Q6ZSJ8 110 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 RASSF6Q6ZTQ3 369 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-227ENST00000485102 GALNT4Q8N4A0 578 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 SCCPDHQ8NBX0 429 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 OR4C15Q8NGM1 316 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 OR4K13Q8NH42 304 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 PYDC1Q8WXC3 89 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 DDOQ99489 341 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 RASSF4Q9H2L5 321 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 VCX3BQ9H321 246 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 OR52D1Q9H346 318 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 RPRD1BQ9NQG5 326 aaKnown RBP10.71□□□□□ -0.69
HDAC6-227ENST00000485102 C14orf119Q9NWQ9 140 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 MRPL22Q9NWU5 206 aaKnown RBP10.71□□□□□ -0.69
HDAC6-227ENST00000485102 C1orf123Q9NWV4 160 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 ZNRD1Q9P1U0 126 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 FBLN5Q9UBX5 448 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 VPREB3Q9UKI3 123 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 FAM96BQ9Y3D0 163 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 U3KQV3 271 aa10.71□□□□□ -0.69
HDAC6-227ENST00000485102 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-227ENST00000485102 GGT3PA6NGU5 568 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 BHLHE40O14503 412 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 GYPAP02724 150 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 NOS3P29474 1203 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 GSSP48637 474 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 GUCA2AQ02747 115 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 SNAI3Q3KNW1 292 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 ATPAF1Q5TC12 328 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-227ENST00000485102 PGBD2Q6P3X8 592 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 ZNF826PQ6ZT77 177 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 VMO1Q7Z5L0 202 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 C11orf53Q8IXP5 236 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 PQLC1Q8N2U9 271 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 BOLLQ8N9W6 283 aaKnown RBP10.7□□□□□ -0.7
HDAC6-227ENST00000485102 AQP11Q8NBQ7 271 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 OR5R1Q8NH85 324 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 C8orf46Q8TAG6 207 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 SPSB4Q96A44 273 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 C12orf43Q96C57 262 aaKnown RBP10.7□□□□□ -0.7
HDAC6-227ENST00000485102 GABARAPL1Q9H0R8 117 aa10.7□□□□□ -0.7
HDAC6-227ENST00000485102 TET2Q6N021 2002 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-227ENST00000485102 ZNF816-ZNF321PA0A0X1KG74 233 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 BTBD17A6NE02 478 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 ZNF823P16415 610 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 GRK5P34947 590 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 TGM4P49221 684 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 ESRRGP62508 458 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 PCK2Q16822 640 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 MICBQ29980 383 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 BEAN1Q3B7T3 259 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 DHRS7BQ6IAN0 325 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-227ENST00000485102 ZNF770Q6IQ21 691 aaPredicted RBP10.69□□□□□ -0.7
HDAC6-227ENST00000485102 C11orf88Q6PI97 169 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 SLC36A1Q7Z2H8 476 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 CMTM4Q8IZR5 234 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 OR2AE1Q8NHA4 323 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 TEX47Q8TBZ9 253 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 FANK1Q8TC84 345 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 RDH12Q96NR8 316 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 FEVQ99581 238 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 DNTTIP1Q9H147 329 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 IL20Q9NYY1 176 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 CDH10Q9Y6N8 788 aa10.69□□□□□ -0.7
HDAC6-227ENST00000485102 A6NLC8 198 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 RNASEK-C17orf49H0YIS7 233 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-227ENST00000485102 XRCC2O43543 280 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 BAG2O95816 211 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 IFNGP01579 166 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 HLA-DQA2P01906 255 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 OPN1MWP04001 364 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 HMGN1P05114 100 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 GRPP07492 148 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 CSF1P09603 554 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 OPN1MW2P0DN77 364 aa10.68□□□□□ -0.7
HDAC6-227ENST00000485102 OPN1MW3P0DN78 364 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms