RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 WDR82Q6UXN9 313 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 DHFR2Q86XF0 187 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 KIR3DL3Q8N743 410 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 OR6K6Q8NGW6 343 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 NPRL2Q8WTW4 380 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 LRRC29Q8WV35 223 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 DYRK2Q92630 601 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 TAF15Q92804 592 aaKnown RBP eCLIP9.46□□□□□ -0.96e-10■■■□□ 17.7
SCFD1-206ENST00000484733 ITFG2Q969R8 447 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 CHIAQ9BZP6 476 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 DNTTIP1Q9H147 329 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 OR10A2Q9H208 303 aa9.46□□□□□ -0.9
SCFD1-206ENST00000484733 PRPF19Q9UMS4 504 aaKnown RBP9.46□□□□□ -0.9
SCFD1-206ENST00000484733 B2RBV5 119 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 SOX14O95416 240 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 TGM4P49221 684 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 ARF6P62330 175 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 GNGT1P63211 74 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 RELBQ01201 579 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 IL5RAQ01344 420 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 KRT74Q7RTS7 529 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 SLC36A1Q7Z2H8 476 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 TIGD4Q8IY51 512 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 OR6N2Q8NGY6 317 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 C8orf46Q8TAG6 207 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 LHX4Q969G2 390 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 NSL1Q96IY1 281 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 CITED1Q99966 193 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 MICU1Q9BPX6 476 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 N6AMT1Q9Y5N5 214 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 MPC1Q9Y5U8 109 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 IGHV3OR15-7A0A075B7D8 119 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.45□□□□□ -0.9
SCFD1-206ENST00000484733 IER3P46695 156 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 ZNF121P58317 390 aaPredicted RBP9.45□□□□□ -0.9
SCFD1-206ENST00000484733 PPP1R8Q12972 351 aaKnown RBP9.45□□□□□ -0.9
SCFD1-206ENST00000484733 CDONQ4KMG0 1287 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 WDR38Q5JTN6 314 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 FAM57BQ71RH2 274 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 ERI1Q8IV48 349 aaKnown RBP9.45□□□□□ -0.9
SCFD1-206ENST00000484733 ZNF454Q8N9F8 522 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 OR10G2Q8NGC3 310 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 TEX47Q8TBZ9 253 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 NIPSNAP1Q9BPW8 284 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 ZNF319Q9P2F9 582 aa9.45□□□□□ -0.9
SCFD1-206ENST00000484733 A0A1B0GVI7 797 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 TMEM210A6NLX4 147 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 CST4P01036 141 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 RAP2AP10114 183 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 GNALP38405 381 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 MS4A2Q01362 244 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 FAM76BQ5HYJ3 339 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 C17orf107Q6ZR85 190 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 VMO1Q7Z5L0 202 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 FTMTQ8N4E7 242 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 GIPC3Q8TF64 312 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 ST8SIA4Q92187 359 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 ITPKCQ96DU7 683 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 CCL13Q99616 98 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 DPAGT1Q9H3H5 408 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 ZNF391Q9UJN7 358 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 RHBDD3Q9Y3P4 386 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 NDUFB3O43676 98 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 GPR137BO60478 399 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 CLPXO76031 633 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 H2BFMP0C1H6 154 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 HOXB6P17509 224 aaKnown RBP9.44□□□□□ -0.9
SCFD1-206ENST00000484733 STUMQ69YW2 141 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 GDPGP1Q6ZNW5 385 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 C1orf122Q6ZSJ8 110 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 SCCPDHQ8NBX0 429 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 OTOSQ8NHW6 89 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 PGAM5Q96HS1 289 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 AMELYQ99218 206 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 FEVQ99581 238 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 DCTN5Q9BTE1 182 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 RTL8AQ9BWD3 113 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 MED20Q9H944 212 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 TNFRSF19Q9NS68 423 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 CAB39Q9Y376 341 aaPredicted RBP9.44□□□□□ -0.9
SCFD1-206ENST00000484733 U3KQV3 271 aa9.44□□□□□ -0.9
SCFD1-206ENST00000484733 A0A0U1RQK1 487 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 ANXA2P2A6NMY6 339 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 ACOT8O14734 319 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 AMY2BP19961 511 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 PAICSP22234 425 aaKnown RBP9.43□□□□□ -0.9
SCFD1-206ENST00000484733 CSNK2BP67870 215 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 POU4F2Q12837 409 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 PDLIM3Q53GG5 364 aaPredicted RBP9.43□□□□□ -0.9
SCFD1-206ENST00000484733 CMTM4Q8IZR5 234 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 OR5P3Q8WZ94 311 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 RAB3IPQ96QF0 476 aaPredicted RBP9.43□□□□□ -0.9
SCFD1-206ENST00000484733 C16orf95Q9H693 158 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 NIPAL2Q9H841 368 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 ACOD1A6NK06 481 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 FAM183AA6NL82 134 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 CDIPTO14735 213 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 TIMM23O14925 209 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 HMGN1P05114 100 aa9.43□□□□□ -0.9
SCFD1-206ENST00000484733 LYNP07948 512 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms