RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-211	ENST00000481154	TUFM	P49411	452 aa	Known RBP	2.58	□□□□□ -2
PTPN12-211	ENST00000481154	BCAP31	P51572	246 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	RGS8	P57771	180 aa	Predicted RBP	2.58	□□□□□ -2
PTPN12-211	ENST00000481154	CRADD	P78560	199 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	CDK5	Q00535	292 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	CCDC153	Q494R4	210 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	DNAL1	Q4LDG9	190 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	HIKESHI	Q53FT3	197 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	MPV17L2	Q567V2	206 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	CLVS2	Q5SYC1	327 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	MLIP	Q5VWP3	458 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	PLCXD3	Q63HM9	321 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	PPP1R2P3	Q6NXS1	205 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	MBOAT2	Q6ZWT7	520 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	DCXR	Q7Z4W1	244 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	LRRC34	Q8IZ02	419 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	FAM58A	Q8N1B3	248 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	GATS	Q8NAP1	163 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	C11orf72	Q8NBR9	251 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	CCDC112	Q8NEF3	446 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	OR11H7	Q8NGC8	314 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	OR5K2	Q8NHB8	316 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	FAM81A	Q8TBF8	368 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	LZIC	Q8WZA0	190 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	SLC35B4	Q969S0	331 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	KIAA1143	Q96AT1	154 aa	Predicted RBP	2.58	□□□□□ -2
PTPN12-211	ENST00000481154	ZNF317	Q96PQ6	595 aa	Predicted RBP	2.58	□□□□□ -2
PTPN12-211	ENST00000481154	TIMM29	Q9BSF4	260 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	FGF23	Q9GZV9	251 aa	Predicted RBP	2.58	□□□□□ -2
PTPN12-211	ENST00000481154	IL22	Q9GZX6	179 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	OR51V1	Q9H2C8	321 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	C1orf198	Q9H425	327 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	TTC21A	Q8NDW8	1320 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	SCN4A	P35499	1836 aa		2.58	□□□□□ -2
PTPN12-211	ENST00000481154	COL22A1	Q8NFW1	1626 aa	Predicted RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	GOLGA8Q	A0A0J9YX86	632 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	IQCF5	A8MTL0	148 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	PDZK1P1	A8MUH7	402 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	CHST10	O43529	356 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	SLC22A5	O76082	557 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	RPP14	O95059	124 aa	Known RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	CCNB2	O95067	398 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	AHSA1	O95433	338 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	SNAI1	O95863	264 aa	Predicted RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	IFNA14	P01570	189 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	ZNF688	P0C7X2	276 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	BCKDHB	P21953	392 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	S100A1	P23297	94 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	CFL1	P23528	166 aa	Known RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	MRPL19	P49406	292 aa	Known RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	CEBPG	P53567	150 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	C21orf59	P57076	290 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	RPS23	P62266	143 aa	Known RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	RPS15	P62841	145 aa	Known RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	TNNC1	P63316	161 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	SEMG2	Q02383	582 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	STX5	Q13190	355 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	ART3	Q13508	389 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	TSC22D1	Q15714	1073 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	HSDL1	Q3SXM5	330 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	TMEM31	Q5JXX7	168 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	TMEM53	Q6P2H8	277 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	C12orf54	Q6X4T0	127 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	COPS6	Q7L5N1	327 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	SCD5	Q86SK9	330 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	CBLN2	Q8IUK8	224 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	C10orf67	Q8IYJ2	551 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	FAM71A	Q8IYT1	594 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	CBR4	Q8N4T8	237 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	NDNF	Q8TB73	568 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	GPX8	Q8TED1	209 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	SLC25A46	Q96AG3	418 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	PANX1	Q96RD7	426 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	BBS2	Q9BXC9	721 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	UPF3B	Q9BZI7	483 aa	Known RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	ACTR3C	Q9C0K3	210 aa	Predicted RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	DRC3	Q9H069	523 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	OR52A5	Q9H2C5	316 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	METTL8	Q9H825	291 aa	Known RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	TRIM45	Q9H8W5	580 aa	Predicted RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	NRBP2	Q9NSY0	501 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	PAQR5	Q9NXK6	330 aa	Predicted RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154	GCNT4	Q9P109	453 aa		2.57	□□□□□ -2
PTPN12-211	ENST00000481154	SAMHD1	Q9Y3Z3	626 aa	Known RBP	2.57	□□□□□ -2
PTPN12-211	ENST00000481154		A0A0A6YYH2	397 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154	IGKV1-8	A0A0C4DH67	115 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154		A0A1W2PPV4	95 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154	C5orf63	A6NC05	138 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154		A6NJ64	397 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154	SMIM23	A6NLE4	172 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154	TRPC5OS	A6NMA1	111 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154	GABRR3	A8MPY1	467 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154		A8MUU9	505 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154	DENR	O43583	198 aa	Known RBP	2.56	□□□□□ -2
PTPN12-211	ENST00000481154	SMIM24	O75264	130 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154	HMGN1	P05114	100 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154	IL6	P05231	212 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154	CD40LG	P29965	261 aa		2.56	□□□□□ -2
PTPN12-211	ENST00000481154	RBM34	P42696	430 aa	Known RBP	2.56	□□□□□ -2
PTPN12-211	ENST00000481154	CRAT	P43155	626 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms