RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 VN1R4Q7Z5H5 301 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 MOB3BQ86TA1 216 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 C9orf40Q8IXQ3 194 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 UBQLNLQ8IYU4 475 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 TMEM123Q8N131 208 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 DHRSXQ8N5I4 330 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 C2orf73Q8N5S3 287 aaPredicted RBP3.99□□□□□ -1.77
UPF3A-205ENST00000479712 SNX31Q8N9S9 440 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 MFSD9Q8NBP5 474 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 OR10A7Q8NGE5 316 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 OR51G2Q8NGK0 314 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 RHEBL1Q8TAI7 183 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 STAG3L4Q8TBR4 150 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 NT5CQ8TCD5 201 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 ZNF418Q8TF45 676 aaPredicted RBP3.99□□□□□ -1.77
UPF3A-205ENST00000479712 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.99□□□□□ -1.771e-6■■□□□ 11.4
UPF3A-205ENST00000479712 WDR34Q96EX3 536 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 PELI1Q96FA3 418 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 PRAP1Q96NZ9 151 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 OR5M11Q96RB7 305 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 ANGPTL4Q9BY76 406 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 DRC3Q9H069 523 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 PPDPFQ9H3Y8 114 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 NMRAL1Q9HBL8 299 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 MIEF1Q9NQG6 463 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 SLC17A5Q9NRA2 495 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 DPM3Q9P2X0 92 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 B4GALT7Q9UBV7 327 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 TMCO1Q9UM00 188 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 WIF1Q9Y5W5 379 aa3.99□□□□□ -1.77
UPF3A-205ENST00000479712 SNRNP200O75643 2136 aaKnown RBP3.98□□□□□ -1.77
UPF3A-205ENST00000479712 ZNF407Q9C0G0 2248 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 SYCE1LA8MT33 242 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 EEF1E1-BLOC1S5C9J1V9 151 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 EEF1E1O43324 174 aaKnown RBP3.98□□□□□ -1.77
UPF3A-205ENST00000479712 ZNF208O43345 1280 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 STK16O75716 305 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 SERPINA6P08185 405 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 SLC35E2BP0CK96 405 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 ICAM2P13598 275 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 MAGEA12P43365 314 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 GANABQ14697 944 aaKnown RBP3.98□□□□□ -1.77
UPF3A-205ENST00000479712 TGFBIQ15582 683 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 TSNQ15631 228 aaKnown RBP3.98□□□□□ -1.77
UPF3A-205ENST00000479712 KCTD19Q17RG1 926 aaPredicted RBP3.98□□□□□ -1.77
UPF3A-205ENST00000479712 FBXL19-AS1Q494R0 122 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 TIGITQ495A1 244 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 GLYR1Q49A26 553 aaPredicted RBP3.98□□□□□ -1.77
UPF3A-205ENST00000479712 KPRPQ5T749 579 aaPredicted RBP3.98□□□□□ -1.77
UPF3A-205ENST00000479712 TMEM205Q6UW68 189 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 C2orf66Q6UXQ4 117 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 FRA10AC1Q70Z53 315 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 CCDC80Q76M96 950 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 TRMT10CQ7L0Y3 403 aaKnown RBP3.98□□□□□ -1.77
UPF3A-205ENST00000479712 THOC6Q86W42 341 aaKnown RBP3.98□□□□□ -1.77
UPF3A-205ENST00000479712 CTAGE3PQ8IX95 158 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 IFT20Q8IY31 132 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 MDS2Q8NDY4 140 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 OR4D5Q8NGN0 318 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 OR1F12Q8NHA8 337 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 ANKRD49Q8WVL7 239 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 PIGCQ92535 297 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 NEIL2Q969S2 332 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 UBE2E3Q969T4 207 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 OR4K3Q96R72 315 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 FMO2Q99518 471 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 AIF1LQ9BQI0 150 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 EFCAB11Q9BUY7 163 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 ROGDIQ9GZN7 287 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 ANKHQ9HCJ1 492 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 SH2D2AQ9NP31 389 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 PAK1IP1Q9NWT1 392 aaPredicted RBP3.98□□□□□ -1.77
UPF3A-205ENST00000479712 CTSFQ9UBX1 484 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 ACOT9Q9Y305 439 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 HEATR5BQ9P2D3 2071 aa3.98□□□□□ -1.77
UPF3A-205ENST00000479712 FRG2CA6NGY1 282 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 SCGNO76038 276 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 DUSP14O95147 198 aaKnown RBP3.97□□□□□ -1.77
UPF3A-205ENST00000479712 KLHL2O95198 593 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 TGM6O95932 706 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 SERPINA7P05543 415 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 RBP1P09455 135 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 ALOX5P09917 674 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 SMIM10L1P0DMW3 83 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 C1GALT1C1LP0DN25 315 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 PNMTP11086 282 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 SERPINB8P50452 374 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 SLC25A1P53007 311 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 EMP2P54851 167 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 STXBP1P61764 594 aaKnown RBP3.97□□□□□ -1.77
UPF3A-205ENST00000479712 CXCL6P80162 114 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 MRPS25P82663 173 aaKnown RBP3.97□□□□□ -1.77
UPF3A-205ENST00000479712 TGM3Q08188 693 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 RBMY1FQ15415 496 aaKnown RBP3.97□□□□□ -1.77
UPF3A-205ENST00000479712 FAM83EQ2M2I3 478 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 TCTEX1D4Q5JR98 221 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 PAGE2BQ5JRK9 111 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 RNLSQ5VYX0 342 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 TMIGD1Q6UXZ0 262 aa3.97□□□□□ -1.77
UPF3A-205ENST00000479712 MBOAT1Q6ZNC8 495 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms