RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PTGFRP43088 359 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 EIF2B2P49770 351 aaKnown RBP6.92□□□□□ -1.3
VMA21-203ENST00000477649 MECP2P51608 486 aaKnown RBP6.92□□□□□ -1.3
VMA21-203ENST00000477649 QRFPP83859 136 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 MRPL49Q13405 166 aaKnown RBP6.92□□□□□ -1.3
VMA21-203ENST00000477649 OR8B8Q15620 311 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 KISS1Q15726 138 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 ACTBL2Q562R1 376 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 PABPC1L2AQ5JQF8 200 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 METTL11BQ5VVY1 283 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 CD276Q5ZPR3 534 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 GLIPR1L1Q6UWM5 242 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 UNQ6126/PRO20091Q6UXV3 157 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 Q6ZS92 163 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 ASCL5Q7RTU5 278 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 C1orf174Q8IYL3 243 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 IZUMO1Q8IYV9 350 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 ZNF101Q8IZC7 436 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 TCTE3Q8IZS6 198 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 GABRG1Q8N1C3 465 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 UBE2J2Q8N2K1 259 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 CSNK2A3Q8NEV1 391 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 OR4D6Q8NGJ1 314 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 OR5L1Q8NGL2 311 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 OR6F1Q8NGZ6 308 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 AQP3Q92482 292 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 SLC7A6Q92536 515 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 UPRTQ96BW1 309 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 LYZL4Q96KX0 146 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 SLC25A21Q9BQT8 299 aaPredicted RBP6.92□□□□□ -1.3
VMA21-203ENST00000477649 GPN1Q9HCN4 374 aaPredicted RBP6.92□□□□□ -1.3
VMA21-203ENST00000477649 OBP2BQ9NPH6 170 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 MCUBQ9NWR8 336 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 PTTG3PQ9NZH4 202 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 ZNF224Q9NZL3 707 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 CLCF1Q9UBD9 225 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 SLC7A11Q9UPY5 501 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 PIGLQ9Y2B2 252 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 N6AMT1Q9Y5N5 214 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 LIPGQ9Y5X9 500 aa6.92□□□□□ -1.3
VMA21-203ENST00000477649 ZNF292O60281 2723 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 ZNF816-ZNF321PA0A0X1KG74 233 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 A0A1B0GUH1 482 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 hCG_38984A0A1B0GV85 526 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 SERPINE3A8MV23 424 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 SNRPGP15A8MWD9 76 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 MKRN2OSH3BPM6 223 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 H3BSH0 61 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 RAB27BO00194 218 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 AKR7A2O43488 359 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 KDM4BO94953 1096 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 NDUFB6O95139 128 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 TGM6O95932 706 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 CYB5AP00167 134 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 IL5P05113 134 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 WT1P19544 449 aaPredicted RBP6.91□□□□□ -1.3
VMA21-203ENST00000477649 CPT2P23786 658 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 APLNRP35414 380 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 SRP9P49458 86 aaKnown RBP6.91□□□□□ -1.3
VMA21-203ENST00000477649 RBP2P50120 134 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 FUT6P51993 359 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 EFNB2P52799 333 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 RRAS2P62070 204 aaPredicted RBP6.91□□□□□ -1.3
VMA21-203ENST00000477649 FAPQ12884 760 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 MADCAM1Q13477 382 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 RBMS2Q15434 407 aaKnown RBP6.91□□□□□ -1.3
VMA21-203ENST00000477649 GUSBP1Q15486 140 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 GFOD2Q3B7J2 385 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 PCGF3Q3KNV8 242 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 ZNF260Q3ZCT1 412 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 KRTCAP3Q53RY4 240 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 RNFT1Q5M7Z0 435 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 FAM214BQ7L5A3 538 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 NUFIP2Q7Z417 695 aaKnown RBP6.91□□□□□ -1.3
VMA21-203ENST00000477649 C17orf78Q8N4C9 275 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 FAM89BQ8N5H3 189 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 ZSCAN4Q8NAM6 433 aaPredicted RBP6.91□□□□□ -1.3
VMA21-203ENST00000477649 PXT1Q8NFP0 134 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 OR1K1Q8NGR3 316 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 OR10R2Q8NGX6 335 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 OR6K3Q8NGY3 331 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 AKR7LQ8NHP1 331 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 UBASH3BQ8TF42 649 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 ASB13Q8WXK3 278 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 BCL2L2Q92843 193 aaPredicted RBP6.91□□□□□ -1.3
VMA21-203ENST00000477649 SEH1LQ96EE3 360 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 TM2D1Q9BX74 207 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 TMEM59Q9BXS4 323 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 ALX4Q9H161 411 aaPredicted RBP6.91□□□□□ -1.3
VMA21-203ENST00000477649 NPDC1Q9NQX5 325 aaPredicted RBP6.91□□□□□ -1.3
VMA21-203ENST00000477649 NUDT15Q9NV35 164 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 IL36GQ9NZH8 169 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 DKK4Q9UBT3 224 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 KLK11Q9UBX7 282 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 KCNN3Q9UGI6 736 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 SCP2D1Q9UJQ7 156 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 NOP16Q9Y3C1 178 aaKnown RBP6.91□□□□□ -1.3
VMA21-203ENST00000477649 ALG5Q9Y673 324 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 KIAA1549Q9HCM3 1950 aa6.91□□□□□ -1.3
VMA21-203ENST00000477649 IGKV1-9A0A0C4DH69 117 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms