RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ME2P23368 584 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 CCNG1P51959 295 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 KHDRBS2Q5VWX1 349 aaKnown RBP3.43□□□□□ -1.86
VPS50-212ENST00000476413 STEAP4Q687X5 459 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 SLC25A25Q6KCM7 469 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 CD300LGQ6UXG3 332 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 SLC30A8Q8IWU4 369 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 TMEM256Q8N2U0 113 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 TTLQ8NG68 377 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 RXFP2Q8WXD0 754 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 CACNG8Q8WXS5 425 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 RDH12Q96NR8 316 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 OR4K3Q96R72 315 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 SPIN2AQ99865 258 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 GABRG3Q99928 467 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 SPIN2BQ9BPZ2 258 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 ADA2Q9NZK5 511 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 SIGLEC7Q9Y286 467 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 KLF12Q9Y4X4 402 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 HES2Q9Y543 173 aa3.43□□□□□ -1.86
VPS50-212ENST00000476413 COL27A1Q8IZC6 1860 aaPredicted RBP3.43□□□□□ -1.86
VPS50-212ENST00000476413 COLCA2A8K830 154 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 PLEKHA8P1O95397 391 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 GCGP01275 180 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 CXCR1P25024 350 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 NPY1RP25929 384 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 SHISA6Q6ZSJ9 500 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 ARHGAP18Q8N392 663 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 DRAM1Q8N682 238 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 TMEM234Q8WY98 164 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 RERGQ96A58 199 aaPredicted RBP3.42□□□□□ -1.86
VPS50-212ENST00000476413 SLC25A46Q96AG3 418 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 TMEM175Q9BSA9 504 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 PLEKHF2Q9H8W4 249 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 EXOSC4Q9NPD3 245 aaKnown RBP3.42□□□□□ -1.86
VPS50-212ENST00000476413 VAX2Q9UIW0 290 aa3.42□□□□□ -1.86
VPS50-212ENST00000476413 CCL15-CCL14A0A0B4J2E2 113 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 DFFAO00273 331 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 CHMP2AO43633 222 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 TRAPPC6AO75865 159 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 MT-ND4P03905 459 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 HCCSP53701 268 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 ATP5J2P56134 94 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 PSMC5P62195 406 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 XIAPP98170 497 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 KDSRQ06136 332 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 ZNF816Q0VGE8 651 aaPredicted RBP3.41□□□□□ -1.86
VPS50-212ENST00000476413 CCL15Q16663 113 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 SLC25A35Q3KQZ1 300 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 C6orf99Q4VX62 202 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 TEX30Q5JUR7 227 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 OPN5Q6U736 354 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 GATSQ8NAP1 163 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 KCNS3Q9BQ31 491 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 TIMM29Q9BSF4 260 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 ARV1Q9H2C2 271 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 IFNKQ9P0W0 207 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 GGA2Q9UJY4 613 aa3.41□□□□□ -1.86
VPS50-212ENST00000476413 KIF26AQ9ULI4 1882 aaPredicted RBP3.41□□□□□ -1.86
VPS50-212ENST00000476413 TMEM150BA6NC51 233 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 PSPHP1O15172 72 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 EIF1BO60739 113 aaKnown RBP3.4□□□□□ -1.87
VPS50-212ENST00000476413 SMC2O95347 1197 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 PTTG1O95997 202 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 PAHP00439 452 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 HLA-DQB1P01920 261 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 PTNP21246 168 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 GNRHRP30968 328 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 EIF1P41567 113 aaKnown RBP3.4□□□□□ -1.87
VPS50-212ENST00000476413 SLC35B1P78383 322 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 IFITM3Q01628 133 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 INCA1Q0VD86 236 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 HSP90AA4PQ58FG1 418 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 ZNF880Q6PDB4 577 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 TMPRSS11AQ6ZMR5 421 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 OSR2Q8N2R0 312 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 ZNF709Q8N972 641 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 ASCC1Q8N9N2 400 aaKnown RBP3.4□□□□□ -1.87
VPS50-212ENST00000476413 OR13C9Q8NGT0 318 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 CDS1Q92903 461 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 SMARCD1Q96GM5 515 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 OR10C1Q96KK4 312 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 EMC6Q9BV81 110 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 MAP1LC3CQ9BXW4 147 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 CYTL1Q9NRR1 136 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 ZNF835Q9Y2P0 537 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 PLA2R1Q13018 1463 aa3.4□□□□□ -1.87
VPS50-212ENST00000476413 ZNF608Q9ULD9 1512 aaPredicted RBP3.39□□□□□ -1.87
VPS50-212ENST00000476413 SCN1AP35498 2009 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 SIGLEC1Q9BZZ2 1709 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 IGKV6-21A0A0C4DH24 114 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 GSTTP1A0A1W2PQM5 241 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 TTC4O95801 387 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 HOXB8P17481 243 aaPredicted RBP3.39□□□□□ -1.87
VPS50-212ENST00000476413 ARL2P36404 184 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 PMELP40967 661 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 ATP6V1FQ16864 119 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 CPTPQ5TA50 214 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 EPGNQ6UW88 154 aa3.39□□□□□ -1.87
VPS50-212ENST00000476413 H1FOOQ8IZA3 346 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms