RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 PLEKHA2Q9HB19 425 aa10.44□□□□□ -0.74
U2AF1-209ENST00000475639 LAMP3Q9UQV4 416 aa10.44□□□□□ -0.74
U2AF1-209ENST00000475639 SLC5A10A0PJK1 596 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 POM121BA6NF01 834 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 P2RY10O00398 339 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 DRD1P21728 446 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 HOXD9P28356 352 aaPredicted RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 RPS23P62266 143 aaKnown RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 ZNF85Q03923 595 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 DCAF12L2Q5VW00 463 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 DGAT2L7PQ6IED9 249 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 GLIPR1L1Q6UWM5 242 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 DMRTC2Q8IXT2 367 aaPredicted RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 OR52E1Q8NGJ3 308 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 FAM3CQ92520 227 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 WDR13Q9H1Z4 485 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 CA14Q9ULX7 337 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 FLVCR1Q9Y5Y0 555 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 F5P12259 2224 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 A0A0C4DFX4 3053 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 WNT11O96014 354 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 IGHA1P01876 353 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 PMP2P02689 132 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 CCL5P13501 91 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 P2RY4P51582 365 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 CARD18P57730 90 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 TPPP2P59282 170 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 LINC00303Q3SY05 128 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 CD300LDQ6UXZ3 194 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 OR2T6Q8NHC8 308 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 GTF3AQ92664 365 aaKnown RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 EMG1Q92979 244 aaKnown RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 PIGTQ969N2 578 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 C16orf70Q9BSU1 422 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 EPHX3Q9H6B9 360 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 NXT1Q9UKK6 140 aaKnown RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 MYO16Q9Y6X6 1858 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 SCN8AQ9UQD0 1980 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 TRAV36DV7A0A075B6V5 113 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 DCTN6O00399 190 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 NME2P1O60361 137 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 FABP4P15090 132 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 MUC1P15941 1255 aaPredicted RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 FGF7P21781 194 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 SLC6A12P48065 614 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 CSRP2Q16527 193 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 OR2T2Q6IF00 324 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 UQCC3Q6UW78 93 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 RHOUQ7L0Q8 258 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 CDC20BQ86Y33 519 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 DVL3Q92997 716 aaPredicted RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 ADIPOR1Q96A54 375 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 NOL4LQ96MY1 436 aaPredicted RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 TLNRD1Q9H1K6 362 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 CRLF2Q9HC73 371 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 POLDIP2Q9Y2S7 368 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 LOC102724200A0A096LPH7 203 aaPredicted RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 GFYI3L273 518 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 ATF1P18846 271 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 CD70P32970 193 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 UBE2MP61081 183 aaKnown RBP10.43□□□□□ -0.74
U2AF1-209ENST00000475639 DEFB133Q30KQ1 61 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 OR2B11Q5JQS5 317 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 ELFN2Q5R3F8 820 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 NCR3LG1Q68D85 454 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 ZNF620Q6ZNG0 422 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 DPPA4Q7L190 304 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 TCTEX1D1Q8N7M0 179 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 NECAP1Q8NC96 275 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 IFI44Q8TCB0 444 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 BRI3BPQ8WY22 251 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 NMNAT3Q96T66 252 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 HES7Q9BYE0 225 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 FAM117AQ9C073 453 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 WBP1LQ9NX94 342 aa10.43□□□□□ -0.74
U2AF1-209ENST00000475639 FITM1A5D6W6 292 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 NPIPB15A6NHN6 443 aaPredicted RBP10.42□□□□□ -0.74
U2AF1-209ENST00000475639 GPR37O15354 613 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 PLRG1O43660 514 aaKnown RBP10.42□□□□□ -0.74
U2AF1-209ENST00000475639 PSMB6P28072 239 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 CSF2RBP32927 897 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 PRR27Q6MZM9 219 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 TMEM178AQ8NBL3 297 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 TIMP4Q99727 224 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 CALHM2Q9HA72 323 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 ASH2LQ9UBL3 628 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 A4GNTQ9UNA3 340 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 SERINC4A6NH21 518 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 SNRPGP15A8MWD9 76 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 GRPP07492 148 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 CNN1P51911 297 aaKnown RBP10.42□□□□□ -0.74
U2AF1-209ENST00000475639 HNRNPA1L2Q32P51 320 aaKnown RBP10.42□□□□□ -0.74
U2AF1-209ENST00000475639 BAP18Q8IXM2 172 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 OR51S1Q8NGJ8 323 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 HLA-CQ95604 372 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 PAAF1Q9BRP4 392 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 CTDSPLO15194 276 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 IL5P05113 134 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 OR5H8P0DN80 308 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 GLI4P10075 376 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms