RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 OR1S2Q8NGQ3 325 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 OR5W2Q8NH69 310 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 OR2AE1Q8NHA4 323 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 HAVCR2Q8TDQ0 301 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF418Q8TF45 676 aaPredicted RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 MZB1Q8WU39 189 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 VOPP1Q96AW1 172 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 C8orf44Q96CB5 159 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 KIRREL1Q96J84 757 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 LOXL4Q96JB6 756 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 DNAJC30Q96LL9 226 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 MUS81Q96NY9 551 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 LRRC3BQ96PB8 259 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 MICU1Q9BPX6 476 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 SOSTQ9BQB4 213 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 PAAF1Q9BRP4 392 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF649Q9BS31 505 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ABHD14AQ9BUJ0 271 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 CDCA4Q9BXL8 241 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 DUSP16Q9BY84 665 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 AMBRA1Q9C0C7 1298 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 PPDPFQ9H3Y8 114 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 TAF9BQ9HBM6 251 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ZBTB26Q9HCK0 441 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 EXOSC4Q9NPD3 245 aaKnown RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 UQCC1Q9NVA1 299 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 KLRF1Q9NZS2 232 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF222Q9UK12 451 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 CDC42EP3Q9UKI2 254 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 MCTS1Q9ULC4 181 aaKnown RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 B9D1Q9UPM9 204 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 TPRKBQ9Y3C4 175 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ETV7Q9Y603 341 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 TNRC18O15417 2968 aaPredicted RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ATRNL1Q5VV63 1379 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 WDR27A2RRH5 827 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OR2W5A6NFC9 320 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 SERINC4A6NH21 518 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 FAM90A7PA6NKC0 464 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 FAM90A22PA8MWA6 464 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 FAM90A12PA8MX19 464 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 FAM90A23PA8MXZ1 464 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 DEGS1O15121 323 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2BKO60814 126 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 PAGE4O60829 102 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 SCGNO76038 276 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 PRSS23O95084 383 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 AIFM1O95831 613 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 ABHD16AO95870 558 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 NRASP01111 189 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2BJP06899 126 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 LAMP1P11279 417 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 CD1DP15813 335 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 MGMTP16455 207 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HOXB9P17482 250 aaPredicted RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2BOP23527 126 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 FASP25445 335 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 KLRC2P26717 231 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HTR1EP28566 365 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OR10J1P30954 320 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2BBP33778 126 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 WASP42768 502 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 TFPI2P48307 235 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 PDX1P52945 283 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 ACLYP53396 1101 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 F2RL1P55085 397 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 SESN2P58004 480 aaPredicted RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2BDP58876 126 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 RHOBP62745 196 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H2BCP62807 126 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 RPL8P62917 257 aaKnown RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 PAFAH1B2P68402 229 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 SLC35A2P78381 396 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 ZXDAP98168 799 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 UBE2V2Q15819 145 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF77Q15935 545 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 TBR1Q16650 682 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST2H2BEQ16778 126 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 FAM162BQ5T6X4 162 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 TXNRD3NBQ6F5E7 133 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 LAIR2Q6ISS4 152 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 TRMT10BQ6PF06 316 aaKnown RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 KCNIP4Q6PIL6 250 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 LCNL1Q6ZST4 164 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 ESPNLQ6ZVH7 1005 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 DND1Q8IYX4 353 aaKnown RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OR8I2Q8N0Y5 310 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 CA13Q8N1Q1 262 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 LRRC25Q8N386 305 aaPredicted RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 TCTEX1D1Q8N7M0 179 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OR10G4Q8NGN3 311 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OR10G9Q8NGN4 311 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OR2T35Q8NGX2 323 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OR6N2Q8NGY6 317 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OR13G1Q8NGZ3 307 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 OR56B4Q8NH76 319 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 FAM110DQ8TAY7 271 aaPredicted RBP4.51□□□□□ -1.69
COL3A1-205ENST00000470167 SYNPRQ8TBG9 265 aa4.51□□□□□ -1.69
COL3A1-205ENST00000470167 DOK4Q8TEW6 326 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms