RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 A6NLC8 198 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 EI24O14681 340 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 GRPP07492 148 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 GNALP38405 381 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 OR8B8Q15620 311 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 LYPD2Q6UXB3 125 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 DOK3Q7L591 496 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 CBR4Q8N4T8 237 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 UPRTQ96BW1 309 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 PGAM5Q96HS1 289 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 AMELYQ99218 206 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 NUDT16L1Q9BRJ7 211 aaKnown RBP15.91■□□□□ 0.14
COL7A1-207ENST00000467985 NIPAL2Q9H841 368 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 ESM1Q9NQ30 184 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 ERVK-18Q9QC07 812 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 ZNF69Q9UC07 566 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 NKX1-2Q9UD57 310 aaPredicted RBP15.91■□□□□ 0.14
COL7A1-207ENST00000467985 ENOPH1Q9UHY7 261 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 ZNF391Q9UJN7 358 aa15.91■□□□□ 0.14
COL7A1-207ENST00000467985 TMEM89A2RUT3 159 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 OOEPA6NGQ2 149 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 ENSAO43768 121 aaKnown RBP15.9■□□□□ 0.14
COL7A1-207ENST00000467985 SELENOFO60613 162 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 GSK3AP49840 483 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 RPS7P62081 194 aaKnown RBP15.9■□□□□ 0.14
COL7A1-207ENST00000467985 UBA52P62987 128 aaKnown RBP15.9■□□□□ 0.14
COL7A1-207ENST00000467985 FAHD1Q6P587 224 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 ZNF841Q6ZN19 808 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 C9orf139Q6ZV77 190 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 PARP8Q8N3A8 854 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 SIGLECL1Q8N7X8 197 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 ZDHHC22Q8N966 263 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 BOLLQ8N9W6 283 aaKnown RBP15.9■□□□□ 0.14
COL7A1-207ENST00000467985 MS4A7Q9GZW8 240 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-207ENST00000467985 ABCB9Q9NP78 766 aa15.9■□□□□ 0.14
COL7A1-207ENST00000467985 hCG_1807616A0A1W2PRN6 198 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 C3orf80F5H4A9 247 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 LIPFP07098 398 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 PEX2P28328 305 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 MTNR1AP48039 350 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 DAPP51397 102 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 ALDH3A2P51648 485 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 SNAPC1Q16533 368 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 GFOD2Q3B7J2 385 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 C11orf91Q3C1V1 193 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 LPCAT4Q643R3 524 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 SFRP4Q6FHJ7 346 aaPredicted RBP15.89■□□□□ 0.13
COL7A1-207ENST00000467985 C19orf18Q8NEA5 215 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 TECTBQ96PL2 329 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 PRRG3Q9BZD7 231 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 YIPF3Q9GZM5 350 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 VCX3BQ9H321 246 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 BRD7Q9NPI1 651 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 C8orf4Q9NR00 106 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 LAMP5Q9UJQ1 280 aa15.89■□□□□ 0.13
COL7A1-207ENST00000467985 ANXA2P2A6NMY6 339 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 ADAM20O43506 726 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 LHBP01229 141 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 SLC2A5P22732 501 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 NAA10P41227 235 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-207ENST00000467985 CRISP1P54107 249 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 PSMA6P60900 246 aaKnown RBP15.88■□□□□ 0.13
COL7A1-207ENST00000467985 ESRRGP62508 458 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 IL5RAQ01344 420 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 LCN1P1Q5VSP4 162 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 DEGS2Q6QHC5 323 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 GALNT4Q8N4A0 578 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 GCSAMQ8N6F7 178 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 BBS1Q8NFJ9 593 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 ITFG2Q969R8 447 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 MICU1Q9BPX6 476 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 PAPOLGQ9BWT3 736 aaKnown RBP15.88■□□□□ 0.13
COL7A1-207ENST00000467985 TVP23BQ9NYZ1 205 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 ZNF319Q9P2F9 582 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 MPC1Q9Y5U8 109 aa15.88■□□□□ 0.13
COL7A1-207ENST00000467985 ACOD1A6NK06 481 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 TNFRSF13BO14836 293 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-207ENST00000467985 CASQ2O14958 399 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-207ENST00000467985 PLATP00750 562 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 MUC1P15941 1255 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-207ENST00000467985 ALOX5APP20292 161 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 PRTN3P24158 256 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 CFPP27918 469 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 BPIFB3P59826 476 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 APOFQ13790 326 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 MICBQ29980 383 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 TEX36Q5VZQ5 186 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 TMEM236Q5W0B7 351 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 KDM4DQ6B0I6 523 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 KCTD18Q6PI47 426 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-207ENST00000467985 ZNF826PQ6ZT77 177 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 KRT77Q7Z794 578 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 C3orf56Q8N813 242 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 OR1M1Q8NGA1 313 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 TEAD3Q99594 435 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 RIBC2Q9H4K1 309 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 USE1Q9NZ43 259 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 KAAG1Q9UBP8 84 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 RHBDD3Q9Y3P4 386 aa15.87■□□□□ 0.13
COL7A1-207ENST00000467985 TMEM14AQ9Y6G1 99 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms