RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 KIAA1324LA8MWY0 1029 aaPredicted RBP13.07□□□□□ -0.32
PTPN13-203ENST00000427191 AKR7LQ8NHP1 331 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 PRSS45Q7RTY3 260 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 CRYBG1Q9Y4K1 1723 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF716A6NP11 495 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 PPP6CO00743 305 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 MBPP02686 304 aaPredicted RBP13.07□□□□□ -0.32
PTPN13-203ENST00000427191 RAB24Q969Q5 203 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 CLDN23Q96B33 292 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 LRFN3Q9BTN0 628 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 HES7Q9BYE0 225 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF768Q9H5H4 540 aaKnown RBP13.07□□□□□ -0.32
PTPN13-203ENST00000427191 SIT1Q9Y3P8 196 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 TAPBPO15533 448 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 EDN3P14138 238 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 GZMKP49863 264 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 SMAD2Q15796 467 aaKnown RBP13.07□□□□□ -0.32
PTPN13-203ENST00000427191 GGNBP1Q5YKI7 109 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 STUMQ69YW2 141 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 GPR137Q96N19 417 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 IGLV3-10A0A075B6K4 115 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 PNLIPRP2P54317 469 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 DUSP5Q16690 384 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 SPICQ8N5J4 248 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 BHLHE23Q8NDY6 225 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 MS4A10Q96PG2 267 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 HCFC1R1Q9NWW0 138 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 TRAPPC4Q9Y296 219 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 ATP23Q9Y6H3 246 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 PIAS2O75928 621 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 GNB2P62879 340 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 FAM3AP98173 230 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 GPNMBQ14956 572 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 SPRED3Q2MJR0 410 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF385BQ569K4 471 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 DLEU7Q6UYE1 221 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 SLC16A12Q6ZSM3 486 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 SLC36A1Q7Z2H8 476 aa13.07□□□□□ -0.32
PTPN13-203ENST00000427191 PARP12Q9H0J9 701 aaKnown RBP13.07□□□□□ -0.32
PTPN13-203ENST00000427191 FRG2CA6NGY1 282 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 SIRPB1O00241 398 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 PMCHP20382 165 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 ACKR1Q16570 336 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 RNASEKQ6P5S7 137 aaKnown RBP13.06□□□□□ -0.32
PTPN13-203ENST00000427191 PRSS3P2Q8NHM4 247 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF426Q9BUY5 554 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.06□□□□□ -0.32
PTPN13-203ENST00000427191 OR5AL1P0C617 328 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 MIDNQ504T8 468 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 TRIM61Q5EBN2 209 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 TMEM40Q8WWA1 233 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 FLVCR2Q9UPI3 526 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 CRYGNQ8WXF5 182 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 TEX101Q9BY14 249 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 SIGLEC1Q9BZZ2 1709 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 DNAJC25-GNG10A0A024R161 153 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 EPXP11678 715 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 HTR1DP28221 377 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 FAM78AQ5JUQ0 283 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 THOC3Q96J01 351 aaKnown RBP13.06□□□□□ -0.32
PTPN13-203ENST00000427191 MAP1LC3CQ9BXW4 147 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 TMEM191AQ9H0A3 160 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 CLEC2LP0C7M8 214 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 FABP4P15090 132 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF740Q8NDX6 193 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 MS4A6EQ96DS6 147 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 EDEM2Q9BV94 578 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 A0A1B0GTQ1 180 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 SP1P08047 785 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 RCL1Q9Y2P8 373 aaKnown RBP13.06□□□□□ -0.32
PTPN13-203ENST00000427191 CXorf51AA0A1B0GTR3 108 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 PSMB2P49721 201 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 FFAR4Q5NUL3 377 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 FAHD2BQ6P2I3 314 aaPredicted RBP13.06□□□□□ -0.32
PTPN13-203ENST00000427191 OR52L2PQ8NGH6 319 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 OIT3Q8WWZ8 545 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 FAHD2AQ96GK7 314 aa13.06□□□□□ -0.32
PTPN13-203ENST00000427191 MRPL22Q9NWU5 206 aaKnown RBP13.06□□□□□ -0.32
PTPN13-203ENST00000427191 SMIM6P0DI80 62 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 PPOXP50336 477 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 NHLRC1Q6VVB1 395 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 PTGER1P34995 402 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 HAAOP46952 286 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 TCTAP57738 103 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 POMT2Q9UKY4 750 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 SMIM18P0DKX4 95 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 IAPPP10997 89 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 SNRPNP63162 240 aaKnown RBP13.05□□□□□ -0.32
PTPN13-203ENST00000427191 RPL18Q07020 188 aaKnown RBP13.05□□□□□ -0.32
PTPN13-203ENST00000427191 FAM53BQ14153 422 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 AFMIDQ63HM1 303 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 LINC00696Q6ZRV3 163 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 PCNPQ8WW12 178 aaKnown RBP13.05□□□□□ -0.32
PTPN13-203ENST00000427191 NUMBLQ9Y6R0 609 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 ANKRD31Q8N7Z5 1873 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 SLC17A2O00624 439 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 OR3A1P47881 315 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 ZNF766Q5HY98 468 aa13.05□□□□□ -0.32
PTPN13-203ENST00000427191 THAP10Q9P2Z0 257 aaPredicted RBP13.05□□□□□ -0.32
PTPN13-203ENST00000427191 SCN9AQ15858 1988 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms