RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 OR14K1Q8NGZ2 314 aa20.75■□□□□ 0.91
VEGFA-209ENST00000425836 HAVCR2Q8TDQ0 301 aa20.75■□□□□ 0.91
VEGFA-209ENST00000425836 ITLN1Q8WWA0 313 aa20.75■□□□□ 0.91
VEGFA-209ENST00000425836 DVL3Q92997 716 aaPredicted RBP20.75■□□□□ 0.91
VEGFA-209ENST00000425836 MEGF10Q96KG7 1140 aa20.75■□□□□ 0.91
VEGFA-209ENST00000425836 ADAT1Q9BUB4 502 aaKnown RBP20.75■□□□□ 0.91
VEGFA-209ENST00000425836 PAPOLGQ9BWT3 736 aaKnown RBP20.75■□□□□ 0.91
VEGFA-209ENST00000425836 NOP16Q9Y3C1 178 aaKnown RBP20.75■□□□□ 0.91
VEGFA-209ENST00000425836 V9GYS6 101 aa20.75■□□□□ 0.91
VEGFA-209ENST00000425836 A0A1B0GVI7 797 aa20.74■□□□□ 0.91
VEGFA-209ENST00000425836 OR4C45A6NMZ5 311 aa20.74■□□□□ 0.91
VEGFA-209ENST00000425836 CST4P01036 141 aa20.74■□□□□ 0.91
VEGFA-209ENST00000425836 UBCP0CG48 685 aaKnown RBP20.74■□□□□ 0.91
VEGFA-209ENST00000425836 XAF1Q6GPH4 301 aa20.74■□□□□ 0.91
VEGFA-209ENST00000425836 NANOGP1Q8N7R0 232 aa20.74■□□□□ 0.91
VEGFA-209ENST00000425836 C10orf105Q8TEF2 133 aa20.74■□□□□ 0.91
VEGFA-209ENST00000425836 FAM168AQ92567 244 aa20.74■□□□□ 0.91
VEGFA-209ENST00000425836 CDCA4Q9BXL8 241 aa20.74■□□□□ 0.91
VEGFA-209ENST00000425836 PIGLQ9Y2B2 252 aa20.74■□□□□ 0.91
VEGFA-209ENST00000425836 MYO9AB2RTY4 2548 aa20.73■□□□□ 0.91
VEGFA-209ENST00000425836 IGHV1-69-2A0A0G2JMI3 117 aa20.73■□□□□ 0.91
VEGFA-209ENST00000425836 H3BSH0 61 aa20.73■□□□□ 0.91
VEGFA-209ENST00000425836 SYT7O43581 403 aa20.73■□□□□ 0.91
VEGFA-209ENST00000425836 MAB21L1Q13394 359 aa20.73■□□□□ 0.91
VEGFA-209ENST00000425836 TMEM244Q5VVB8 128 aa20.73■□□□□ 0.91
VEGFA-209ENST00000425836 ERGIC3Q9Y282 383 aa20.73■□□□□ 0.91
VEGFA-209ENST00000425836 CACNG2Q9Y698 323 aa20.73■□□□□ 0.91
VEGFA-209ENST00000425836 IGHV4-30-2A0A087WSY4 118 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 ZNF816-ZNF321PA0A0X1KG74 233 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 LOC107986453A0A1B0GWG9 222 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 RP2O75695 350 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 LALBAP00709 142 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 ISG15P05161 165 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 FAHP16930 419 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 TNFRSF1AP19438 455 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 GNALP38405 381 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 SRP9P49458 86 aaKnown RBP20.72■□□□□ 0.91
VEGFA-209ENST00000425836 CCDC58Q4VC31 144 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 TGIF2LYQ8IUE0 185 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 PIGCQ92535 297 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 TREM2Q9NZC2 230 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 MPC1Q9Y5U8 109 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 SIRT4Q9Y6E7 314 aaPredicted RBP20.72■□□□□ 0.91
VEGFA-209ENST00000425836 IGHV3-64DA0A0J9YX35 117 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 TRIM64A6NGJ6 449 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 TRIM64BA6NI03 449 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 ZNF850A8MQ14 1090 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 MYL12BO14950 172 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 RGS10O43665 173 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 ZFPL1O95159 310 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 ACHEP22303 614 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 CD200P41217 278 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 PRDX4Q13162 271 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 IRF3Q14653 427 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 ZBTB37Q5TC79 503 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 RPL22L1Q6P5R6 122 aaKnown RBP20.72■□□□□ 0.91
VEGFA-209ENST00000425836 ZNF676Q8N7Q3 588 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 SPERTQ8NA61 448 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 CCDC54Q8NEL0 328 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 CHODLQ9H9P2 273 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 DLL4Q9NR61 685 aa20.72■□□□□ 0.91
VEGFA-209ENST00000425836 VPS13CQ709C8 3753 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 TRBV2A0A0J9YWF9 115 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 DHRS7CA6NNS2 312 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 WNT4P56705 351 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 RIN1Q13671 783 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 DOC2BQ14184 412 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 CDK5R1Q15078 307 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 CELF2-AS1Q8N7Q2 184 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 RPS4Y2Q8TD47 263 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 PDCD1LG2Q9BQ51 273 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 ZNF275Q9NSD4 429 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-209ENST00000425836 ENPP5Q9UJA9 477 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 BLOC1S6Q9UL45 172 aa20.71■□□□□ 0.91
VEGFA-209ENST00000425836 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.7■□□□□ 0.9
VEGFA-209ENST00000425836 TMEM212A6NML5 194 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 NDUFS8O00217 210 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 OGG1O15527 345 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 LMX1BO60663 402 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 MT-ND2P03891 347 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 GIFP27352 417 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 HNRNPA0Q13151 305 aaKnown RBP20.7■□□□□ 0.9
VEGFA-209ENST00000425836 OR10AC1Q8NH08 325 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 OR8S1Q8NH09 359 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 OR5AK2Q8NH90 309 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 CCL17Q92583 94 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 ITPKCQ96DU7 683 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 GCM1Q9NP62 436 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 TRIM36Q9NQ86 728 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 MAST4O15021 2626 aa20.7■□□□□ 0.9
VEGFA-209ENST00000425836 LOC100289279A0A1B0GTE1 492 aa20.69■□□□□ 0.9
VEGFA-209ENST00000425836 A6NIN4 97 aa20.69■□□□□ 0.9
VEGFA-209ENST00000425836 VWC2LB2RUY7 222 aa20.69■□□□□ 0.9
VEGFA-209ENST00000425836 HFEQ30201 348 aa20.69■□□□□ 0.9
VEGFA-209ENST00000425836 PRSS48Q7RTY5 328 aa20.69■□□□□ 0.9
VEGFA-209ENST00000425836 PIMREGQ9BSJ6 248 aa20.69■□□□□ 0.9
VEGFA-209ENST00000425836 MND1Q9BWT6 205 aa20.69■□□□□ 0.9
VEGFA-209ENST00000425836 HHLA2Q9UM44 414 aa20.69■□□□□ 0.9
VEGFA-209ENST00000425836 PPP1R3CQ9UQK1 317 aa20.69■□□□□ 0.9
VEGFA-209ENST00000425836 LRRC42Q9Y546 428 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms