RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 C9orf139Q6ZV77 190 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 SLC16A9Q7RTY1 509 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 MMD2Q8IY49 270 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 CCNYL1Q8N7R7 359 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 OR4S1Q8NGB4 309 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 FAM76AQ8TAV0 307 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 GEMIN6Q8WXD5 167 aaKnown RBP3.72□□□□□ -1.81
PTPRK-210ENST00000415055 DYRK2Q92630 601 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 GGHQ92820 318 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 SLC25A36Q96CQ1 311 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 NEURL3Q96EH8 262 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 OR7D2Q96RA2 312 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 MRPL57Q9BQC6 102 aaKnown RBP3.72□□□□□ -1.81
PTPRK-210ENST00000415055 LINC00470Q9BZP3 86 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 RNF121Q9H920 327 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 RRAGDQ9NQL2 400 aaPredicted RBP3.72□□□□□ -1.81
PTPRK-210ENST00000415055 DCAF16Q9NXF7 216 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 BAIAP2L1Q9UHR4 511 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 SLC35A3Q9Y2D2 325 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 POFUT2Q9Y2G5 429 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 FIS1Q9Y3D6 152 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 TMED3Q9Y3Q3 217 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 NPTNQ9Y639 398 aa3.72□□□□□ -1.81
PTPRK-210ENST00000415055 DSPPQ9NZW4 1301 aa3.71□□□□□ -1.81
PTPRK-210ENST00000415055 A0A0G2JPF8 293 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 ZNF816-ZNF321PA0A0X1KG74 233 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 BTBD17A6NE02 478 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 CLDN24A6NM45 220 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 HNRNPCL3B7ZW38 293 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 PRSS46E5RG02 174 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 K7EIL1 84 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 CHEK1O14757 476 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 EIF3HO15372 352 aaKnown RBP eCLIP3.71□□□□□ -1.82
PTPRK-210ENST00000415055 ZNF208O43345 1280 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 UGT2B17O75795 530 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 VAMP5O95183 116 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 PPP1R3DO95685 299 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 C6orf47O95873 294 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 TOMM40O96008 361 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 IGHV4-59P01825 116 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 HNRNPCL4P0DMR1 293 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 OR12D1P0DN82 309 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 FCGR1AP12314 374 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 UQCRBP14927 111 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 RPS2P15880 293 aaKnown RBP3.71□□□□□ -1.82
PTPRK-210ENST00000415055 CCNOP22674 350 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 HPCAL1P37235 193 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 MAGEA4P43358 317 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 CNN1P51911 297 aaKnown RBP3.71□□□□□ -1.82
PTPRK-210ENST00000415055 FOXA1P55317 472 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 PKNOX1P55347 436 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 FGF12P61328 243 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 ISL1P61371 349 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 HPCAP84074 193 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 RELQ04864 619 aaPredicted RBP3.71□□□□□ -1.82
PTPRK-210ENST00000415055 PAX8Q06710 450 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 ZNF415Q09FC8 603 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 OPCMLQ14982 345 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 CHI3L2Q15782 390 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 MAPK14Q16539 360 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 ARHGAP11BQ3KRB8 267 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 GPAT3Q53EU6 434 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 ZNF678Q5SXM1 525 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 SPATA46Q5T0L3 261 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 ATAD3BQ5T9A4 648 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 EMBQ6PCB8 327 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 C6orf89Q6UWU4 347 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 LRRN1Q6UXK5 716 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 GDPGP1Q6ZNW5 385 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 LRRC8AQ8IWT6 810 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 CADM2Q8N3J6 435 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 TMEM86BQ8N661 226 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 FAM71CQ8NEG0 241 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 SLC30A7Q8NEW0 376 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 OR2T12Q8NG77 320 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 OR7A2PQ8NGA2 310 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 UPRTQ96BW1 309 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 SLC35G5Q96KT7 338 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 SAMD8Q96LT4 415 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 C17orf77Q96MU5 243 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 LYSTQ99698 3801 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 SSX3Q99909 188 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 PATZ1Q9HBE1 687 aaKnown RBP3.71□□□□□ -1.82
PTPRK-210ENST00000415055 B3GAT2Q9NPZ5 323 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 EXD2Q9NVH0 621 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 B3GNT2Q9NY97 397 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 IL20RAQ9UHF4 553 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 DAPK2Q9UIK4 370 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 RASD1Q9Y272 281 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 STK38LQ9Y2H1 464 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 WDR45Q9Y484 360 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 U3KQV3 271 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 DNAH7Q8WXX0 4024 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 BIRC6Q9NR09 4857 aa3.71□□□□□ -1.82
PTPRK-210ENST00000415055 IGHV2-70DA0A0C4DH43 119 aa3.7□□□□□ -1.82
PTPRK-210ENST00000415055 C3orf84H3BNL1 204 aa3.7□□□□□ -1.82
PTPRK-210ENST00000415055 RPL36A-HNRNPH2H7BZ11 118 aa3.7□□□□□ -1.82
PTPRK-210ENST00000415055 SLC28A1O00337 649 aa3.7□□□□□ -1.82
PTPRK-210ENST00000415055 PEX11AO75192 247 aa3.7□□□□□ -1.82
PTPRK-210ENST00000415055 UBL3O95164 117 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms