RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ARSBP15848 533 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 PSMB1P20618 241 aaKnown RBP10.74□□□□□ -0.69
CHMP3-204ENST00000409727 IFITM3Q01628 133 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 OR8B8Q15620 311 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 TAB1Q15750 504 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 TIMM23BQ5SRD1 257 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 TMEM211Q6ICI0 200 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 Q6ZSR3 168 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 FJX1Q86VR8 437 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 CMTM4Q8IZR5 234 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 CCDC54Q8NEL0 328 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 OR4M2Q8NGB6 313 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 OR6M1Q8NGM8 313 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 SYNPRQ8TBG9 265 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 SLC25A28Q96A46 364 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 SLC25A38Q96DW6 304 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 SDHCQ99643 169 aaPredicted RBP10.74□□□□□ -0.69
CHMP3-204ENST00000409727 METTL17Q9H7H0 456 aaPredicted RBP10.74□□□□□ -0.69
CHMP3-204ENST00000409727 OBP2BQ9NPH6 170 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 CYSLTR2Q9NS75 346 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 MRPS7Q9Y2R9 242 aaKnown RBP10.74□□□□□ -0.69
CHMP3-204ENST00000409727 RHBDD3Q9Y3P4 386 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 ACACBO00763 2458 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 FAM230AA0A1W2PPH8 454 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 GMDSO60547 372 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 SMPD2O60906 423 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 NRASP01111 189 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 APOA1P02647 267 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 OR3A4PP47883 348 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 EFNB2P52799 333 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 PPA1Q15181 289 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 AWAT2Q6E213 333 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 OR10K2Q6IF99 312 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 C22orf34Q6ZV56 151 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 OR5L1Q8NGL2 311 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 FOXRED1Q96CU9 486 aaPredicted RBP10.74□□□□□ -0.69
CHMP3-204ENST00000409727 C10orf35Q96D05 121 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 MUCL1Q96DR8 90 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 ZC3HAV1LQ96H79 300 aaKnown RBP10.74□□□□□ -0.69
CHMP3-204ENST00000409727 CNTNAP3BQ96NU0 1288 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 REPIN1Q9BWE0 567 aaKnown RBP10.74□□□□□ -0.69
CHMP3-204ENST00000409727 PAPOLGQ9BWT3 736 aaKnown RBP10.74□□□□□ -0.69
CHMP3-204ENST00000409727 CNTNAP3Q9BZ76 1288 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 SRRQ9GZT4 340 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 TBCCD1Q9NVR7 557 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 CRIM1Q9NZV1 1036 aa10.74□□□□□ -0.69
CHMP3-204ENST00000409727 NBEAQ8NFP9 2946 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 PRR14LQ5THK1 2151 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 ZNF816-ZNF321PA0A0X1KG74 233 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 LOC100289279A0A1B0GTE1 492 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 TMEM272A0A1B0GTI8 110 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 DHRS7CA6NNS2 312 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 ZNF850A8MQ14 1090 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 UPK1BO75841 260 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 PLATP00750 562 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 CCKARP32238 428 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 ART1P52961 327 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 PPP1CBP62140 327 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 RNASE12Q5GAN4 147 aaKnown RBP10.73□□□□□ -0.69
CHMP3-204ENST00000409727 CLVS2Q5SYC1 327 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 PLCXD3Q63HM9 321 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 FAM166AQ6J272 317 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 MOB3CQ70IA8 216 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 UTS2BQ765I0 119 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 ANGPTL5Q86XS5 388 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 OR1J1Q8NGS3 322 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 DVL3Q92997 716 aaPredicted RBP10.73□□□□□ -0.69
CHMP3-204ENST00000409727 FAM46BQ96A09 425 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 MRI1Q9BV20 369 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 OR2J1Q9GZK6 312 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 GPR160Q9UJ42 338 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 ETV7Q9Y603 341 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 COL6A6A6NMZ7 2263 aa10.73□□□□□ -0.69
CHMP3-204ENST00000409727 C16orf97H3BN30 126 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 IGLV1-44P01699 117 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 UCP2P55851 309 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 KISS1Q15726 138 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 BAK1Q16611 211 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 ST3GAL2Q16842 350 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 C1orf100Q5SVJ3 147 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 OR2T2Q6IF00 324 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 XKRXQ6PP77 449 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 METAP1DQ6UB28 335 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-204ENST00000409727 LYPD6Q86Y78 171 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 STEAP2Q8NFT2 490 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 SLC25A40Q8TBP6 338 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 UQCC2Q9BRT2 126 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 RHBDL2Q9NX52 303 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 ELOVL5Q9NYP7 299 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 NPAP1Q9NZP6 1156 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 KCNN3Q9UGI6 736 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 MRPS28Q9Y2Q9 187 aaKnown RBP10.72□□□□□ -0.69
CHMP3-204ENST00000409727 LINC00854A0A1B0GVQ3 168 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 FAM90A27PA6NNH2 459 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 LILRA1O75019 489 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 TMEM127O75204 238 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 ZNF35P13682 527 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 CFPP27918 469 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 CALCRP30988 508 aa10.72□□□□□ -0.69
CHMP3-204ENST00000409727 PITPNBP48739 271 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms