RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 MITFO75030 526 aaPredicted RBP11.08□□□□□ -0.64
SDF4-203ENST00000403997 MRPL3P09001 348 aaKnown RBP11.08□□□□□ -0.64
SDF4-203ENST00000403997 FASP25445 335 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 NPY4RP50391 375 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 PSMA6P60900 246 aaKnown RBP11.08□□□□□ -0.64
SDF4-203ENST00000403997 LCN1P1Q5VSP4 162 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 KCTD18Q6PI47 426 aaPredicted RBP11.08□□□□□ -0.64
SDF4-203ENST00000403997 AMIGO2Q86SJ2 522 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 ZDHHC13Q8IUH4 622 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 C11orf53Q8IXP5 236 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 FTMTQ8N4E7 242 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 GCSAMQ8N6F7 178 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 ZDHHC22Q8N966 263 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 OR1M1Q8NGA1 313 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 OR8B12Q8NGG6 310 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 LRRC29Q8WV35 223 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 PIGCQ92535 297 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 MICU1Q9BPX6 476 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 PRRG3Q9BZD7 231 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 RASSF4Q9H2L5 321 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 RNPEPL1Q9HAU8 725 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 KRT84Q9NSB2 600 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 H2AFY2Q9P0M6 372 aaPredicted RBP11.08□□□□□ -0.64
SDF4-203ENST00000403997 LRP12Q9Y561 859 aa11.08□□□□□ -0.64
SDF4-203ENST00000403997 IGHV3OR15-7A0A075B7D8 119 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 ZNF850A8MQ14 1090 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 C22orf46C9J442 243 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 TNFRSF13BO14836 293 aaPredicted RBP11.07□□□□□ -0.64
SDF4-203ENST00000403997 ENSAO43768 121 aaKnown RBP11.07□□□□□ -0.64
SDF4-203ENST00000403997 LHBP01229 141 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 PPIAL4GP0DN37 164 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 IGHV4-38-2P0DP08 117 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 FGF12P61328 243 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 CSNK2BP67870 215 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 IL5RAQ01344 420 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 PRDX4Q13162 271 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 CD276Q5ZPR3 534 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 DEGS2Q6QHC5 323 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 BCDIN3DQ7Z5W3 292 aaKnown RBP11.07□□□□□ -0.64
SDF4-203ENST00000403997 WDR86Q86TI4 376 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 FAM90A1Q86YD7 464 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 GALNT4Q8N4A0 578 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 TCEANCQ8N8B7 351 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 DACT3Q96B18 629 aaPredicted RBP11.07□□□□□ -0.64
SDF4-203ENST00000403997 UPRTQ96BW1 309 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 LYZL4Q96KX0 146 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 RTL8AQ9BWD3 113 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 MROQ9BYG7 248 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 CTSZQ9UBR2 303 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 MPC1Q9Y5U8 109 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 TMEM14AQ9Y6G1 99 aa11.07□□□□□ -0.64
SDF4-203ENST00000403997 TMEM269A0A1B0GVZ9 245 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 M0R129 80 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 CDIPTO14735 213 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 CST4P01036 141 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 FCGR1AP12314 374 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 EGR1P18146 543 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 ACKR3P25106 362 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 EPHA2P29317 976 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 MTNR1AP48039 350 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 UBA52P62987 128 aaKnown RBP11.06□□□□□ -0.64
SDF4-203ENST00000403997 MICBQ29980 383 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 KDM4DQ6B0I6 523 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 KCTD8Q6ZWB6 473 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 MEPCEQ7L2J0 689 aaKnown RBP11.06□□□□□ -0.64
SDF4-203ENST00000403997 DOK3Q7L591 496 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 COMMD2Q86X83 199 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 FAM81AQ8TBF8 368 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 ASB17Q8WXJ9 295 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 LRTOMTQ8WZ04 291 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 ITPKCQ96DU7 683 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 RNF170Q96K19 258 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 DUX5Q96PT3 197 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 HIST1H2AAQ96QV6 131 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 TTTY10Q9BZA0 68 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 ABCB9Q9NP78 766 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 ZNF391Q9UJN7 358 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 IKZF2Q9UKS7 526 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 COPS3Q9UNS2 423 aa11.06□□□□□ -0.64
SDF4-203ENST00000403997 TRAV40A0A0B4J280 105 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 TMEM89A2RUT3 159 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 ACOD1A6NK06 481 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 ZAR1LA6NP61 321 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 DVL1O14640 695 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 TMPRSS2O15393 492 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 ZNF254O75437 659 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 CIB2O75838 187 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 LIPFP07098 398 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 MUC1P15941 1255 aaPredicted RBP11.05□□□□□ -0.64
SDF4-203ENST00000403997 CFHR2P36980 270 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 MAP2K3P46734 347 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 RIDAP52758 137 aaKnown RBP11.05□□□□□ -0.64
SDF4-203ENST00000403997 GMFBP60983 142 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 ROM1Q03395 351 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 BAMBIQ13145 260 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 TUSC1Q2TAM9 212 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 SLX4IPQ5VYV7 408 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 TEX36Q5VZQ5 186 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 WDR82Q6UXN9 313 aa11.05□□□□□ -0.64
SDF4-203ENST00000403997 ZNF679Q8IYX0 411 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms