RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 J3QLW9 94 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 LALBAP00709 142 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 IGHV3-13P01766 116 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 LCATP04180 440 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 RAC2P15153 192 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 ZNF19P17023 458 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 APOBEC3AP31941 199 aaPredicted RBP7.84□□□□□ -1.15
VPS53-203ENST00000401468 ERVS71-1P61550 626 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 ZNF92Q03936 586 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 EMX1Q04741 257 aaPredicted RBP7.84□□□□□ -1.15
VPS53-203ENST00000401468 GK2Q14410 553 aaPredicted RBP7.84□□□□□ -1.15
VPS53-203ENST00000401468 CDK5R1Q15078 307 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 OR8B8Q15620 311 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 WDR38Q5JTN6 314 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 GLYATL3Q5SZD4 288 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 LCE3BQ5TA77 95 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 OR2G6Q5TZ20 316 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 UBE2UQ5VVX9 321 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 DMKNQ6E0U4 476 aaPredicted RBP7.84□□□□□ -1.15
VPS53-203ENST00000401468 ZNF773Q6PK81 442 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 PRSS57Q6UWY2 283 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 FAM220AQ7Z4H9 259 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 SPARTQ8N0X7 666 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 YIPF7Q8N8F6 280 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 OR8B12Q8NGG6 310 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 OR1J1Q8NGS3 322 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 ABHD4Q8TB40 342 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 SLC25A40Q8TBP6 338 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 KLF14Q8TD94 323 aaPredicted RBP7.84□□□□□ -1.15
VPS53-203ENST00000401468 SPRYD4Q8WW59 207 aaPredicted RBP7.84□□□□□ -1.15
VPS53-203ENST00000401468 SGK3Q96BR1 496 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 HAVCR1Q96D42 359 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 LYZL4Q96KX0 146 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 OR2J1Q9GZK6 312 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 PBOV1Q9GZY1 135 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 ACOT13Q9NPJ3 140 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 OR52A1Q9UKL2 312 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 ERGIC3Q9Y282 383 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 LOC100289279A0A1B0GTE1 492 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 A0A1B0GTI1 187 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 TMEM212A6NML5 194 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 IQCF6A8MYZ5 107 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 LOC110117498-PIK3R3F6TDL0 507 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 MYL12BO14950 172 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 PLPP2O43688 288 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 ADH4P08319 380 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 RPSAP08865 295 aaKnown RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 OR4A8P0C604 315 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 SLC2A1P11166 492 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 ATP6V1B1P15313 513 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 CCNOP22674 350 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 CFL1P23528 166 aaKnown RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 TTKP33981 857 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 MPV17P39210 176 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 SLC6A9P48067 706 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 TAS2R43P59537 309 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 FAM3AP98173 230 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 PSG7Q13046 419 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 GPR50Q13585 617 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 ALKBH1Q13686 389 aaKnown RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 SPHARQ15513 63 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 ZNF718Q3SXZ3 478 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 XAF1Q6GPH4 301 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 RGS7BPQ6MZT1 257 aaPredicted RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 RPL22L1Q6P5R6 122 aaKnown RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 FAM57BQ71RH2 274 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 ZCCHC24Q8N2G6 241 aaKnown RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 MUC15Q8N387 334 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 CCDC54Q8NEL0 328 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 FCGR1BQ92637 280 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 SMIM19Q96E16 107 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 TRMT61AQ96FX7 289 aaKnown RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 PGLYRP3Q96LB9 341 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 OR5M11Q96RB7 305 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 TMPRSS13Q9BYE2 586 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 MRPL37Q9BZE1 423 aaKnown RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 OR10A2Q9H208 303 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 PLK3Q9H4B4 646 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 TRIM36Q9NQ86 728 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 CHCHD3Q9NX63 227 aaKnown RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 FBXO9Q9UK97 447 aaPredicted RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 SLC22A13Q9Y226 551 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 CMAHPQ9Y471 501 aa7.83□□□□□ -1.16
VPS53-203ENST00000401468 SIRT4Q9Y6E7 314 aaPredicted RBP7.83□□□□□ -1.16
VPS53-203ENST00000401468 B9A039 149 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 SC5DO75845 299 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 RPP14O95059 124 aaKnown RBP7.82□□□□□ -1.16
VPS53-203ENST00000401468 ZFPL1O95159 310 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 ANXA2P07355 339 aaKnown RBP7.82□□□□□ -1.16
VPS53-203ENST00000401468 UBCP0CG48 685 aaKnown RBP7.82□□□□□ -1.16
VPS53-203ENST00000401468 PAX1P15863 534 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 EEF1B2P24534 225 aaKnown RBP7.82□□□□□ -1.16
VPS53-203ENST00000401468 SERPINF1P36955 418 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 PSMB10P40306 273 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 MMP15P51511 669 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 GBX2P52951 348 aaPredicted RBP7.82□□□□□ -1.16
VPS53-203ENST00000401468 CDH15P55291 814 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 MLLT11Q13015 90 aaPredicted RBP7.82□□□□□ -1.16
VPS53-203ENST00000401468 MALLQ13021 153 aa7.82□□□□□ -1.16
VPS53-203ENST00000401468 TPBGQ13641 420 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms