RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 OR5H6Q8NGV6 325 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 FCGR2CP31995 323 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 LTBRP36941 435 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 RAB1AP62820 205 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 ELFN2Q5R3F8 820 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 OR13C8Q8NGS7 320 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 ADAT1Q9BUB4 502 aaKnown RBP12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 TREM2Q9NZC2 230 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 A0A087WV62 115 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 LCN15Q6UWW0 184 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 APH1BQ8WW43 257 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 CMTM3Q96MX0 182 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 TXNIPQ9H3M7 391 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 SLCO1C1Q9NYB5 712 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 NPAP1Q9NZP6 1156 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 R4GMQ9 66 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF724A8MTY0 619 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 COX7A1P24310 79 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 DBPQ10586 325 aaPredicted RBP12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 RHBDD2Q6NTF9 364 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 C19orf48Q6RUI8 117 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 OR10V1Q8NGI7 309 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF251Q9BRH9 671 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 SOX7Q9BT81 388 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 ST8SIA3O43173 380 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 OR7C2O60412 319 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 TNFRSF1AP19438 455 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 C3AR1Q16581 482 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 SKA3Q8IX90 412 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 SPNS1Q9H2V7 528 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF331Q9NQX6 463 aaPredicted RBP12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 RFX2P48378 723 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 HMGN3Q15651 99 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 PHYHD1Q5SRE7 291 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 OR52H1Q8NGJ2 320 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 CORO2AQ92828 525 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 PRRC2BQ5JSZ5 2229 aaKnown RBP12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 TRGV10A0A0A0MS01 117 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 HYAL3O43820 417 aaPredicted RBP12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 DIO1P49895 249 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 SMIM21Q3B7S5 101 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 SYT6Q5T7P8 510 aaPredicted RBP12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 TMEM179BQ7Z7N9 219 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 TMEM123Q8N131 208 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 MOB3AQ96BX8 217 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 ST3GAL6Q9Y274 331 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 SPINT1O43278 529 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 C17orf107Q6ZR85 190 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 SIGLEC11Q96RL6 698 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 FOXB1Q99853 325 aa12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 TDRD15B5MCY1 1934 aaKnown RBP12.79□□□□□ -0.36
PCDHA11-201ENST00000398640 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 ABCD3P28288 659 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 PDCD1Q15116 288 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 SPNS3Q6ZMD2 512 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 OR4F5Q8NH21 305 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 UBALD1Q8TB05 177 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 OR4F4Q96R69 305 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 MN1Q10571 1320 aaPredicted RBP12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 IGLV3-16A0A075B6K0 115 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 EGR3Q06889 387 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 TOR2AQ5JU69 321 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 LYSMD2Q8IV50 215 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC7A6Q92536 515 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 DHRS9Q9BPW9 319 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 MAGT1Q9H0U3 335 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF835Q9Y2P0 537 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 TMEM200CA6NKL6 621 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 H2AFB1P0C5Y9 115 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 HRH1P35367 487 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 B3GNTL1Q67FW5 361 aaPredicted RBP12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 ADGRG3Q86Y34 549 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 FAM58AQ8N1B3 248 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 TMEM105Q8N8V8 129 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 NOXO1Q8NFA2 376 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 OR2Y1Q8NGV0 311 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 OR5B3Q8NH48 314 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 SIAEQ9HAT2 523 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 CLCF1Q9UBD9 225 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 ARID1BQ8NFD5 2236 aaPredicted RBP12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 SCN1AP35498 2009 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 TEX51A0A1B0GUA7 166 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 CHEK1O14757 476 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC25A6P12236 298 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 FAHP16930 419 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 RTP5Q14D33 572 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 KIRREL2Q6UWL6 708 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 C16orf47Q6ZP98 133 aaPredicted RBP12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 OR10P1Q8NGE3 313 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 FLVCR2Q9UPI3 526 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 DHHO43323 396 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 PRDX4Q13162 271 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 OR5I1Q13606 314 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 STUMQ69YW2 141 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC51BQ86UW2 128 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 D2HGDHQ8N465 521 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 C17orf78Q8N4C9 275 aa12.78□□□□□ -0.36
PCDHA11-201ENST00000398640 M1APQ8TC57 530 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms