RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 GAS2L1Q99501 681 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 RAB33BQ9H082 229 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 MRPS18BQ9Y676 258 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 DNAJC13O75165 2243 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 OR2M5A3KFT3 312 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 C7orf77A4D0Y5 90 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 CYR61O00622 381 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 ANGPTL7O43827 346 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 GPR137BO60478 399 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 CYTIPO60759 359 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 IGKV1D-16P01601 117 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 FAHP16930 419 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 FPR2P25090 351 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 SRYQ05066 204 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 PLXDC2Q6UX71 529 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 DGAT2L6Q6ZPD8 337 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 SEMA6DQ8NFY4 1073 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF707Q96C28 371 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 VSTM2LQ96N03 204 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 ICAM5Q9UMF0 924 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 SBF1O95248 1867 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 TLCD2A6NGC4 264 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 KLF4O43474 513 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 SSSCA1O60232 199 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 IL9P15248 144 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 ECI1P42126 302 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 KIR3DL2P43630 455 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 RAB4BP61018 213 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 RAB1AP62820 205 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 NECAP1Q8NC96 275 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 TMPRSS5Q9H3S3 457 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 TUBG2Q9NRH3 451 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 KLK13Q9UKR3 277 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 RAB27BO00194 218 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZFAND5O76080 213 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 CST7O76096 145 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 LY86O95711 162 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 FAM157BP0CG42 384 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 MISPQ8IVT2 679 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 C1orf87Q8N0U7 546 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 C15orf54Q8N8G6 183 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 GJC3Q8NFK1 279 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 LILRB1Q8NHL6 650 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 RAB39BQ96DA2 213 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 CRLF2Q9HC73 371 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 STRAPQ9Y3F4 350 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 WDR81Q562E7 1941 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 SOCS1O15524 211 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 ERGP11308 486 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 GLULP15104 373 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 MUC1P15941 1255 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 CTHP32929 405 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 OR3A4PP47883 348 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF133P52736 654 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 SLC37A1P57057 533 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF345Q14585 488 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 MOGAT2Q3SYC2 334 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 TMPPEQ6ZT21 453 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 MRPL21Q7Z2W9 205 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 ATG4DQ86TL0 474 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF426Q9BUY5 554 aa11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 MRPS17Q9Y2R5 130 aaKnown RBP11.75□□□□□ -0.53
TRAPPC9-201ENST00000389328 RCC1P18754 421 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 CD38P28907 300 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 GGTLC2Q14390 218 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 FAM109BQ6ICB4 259 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 OR51F2Q8NH61 342 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 SAT2Q96F10 170 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 MRGPRX1Q96LB2 322 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 NRIP2Q9BQI9 281 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 PRO1933Q9H354 126 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 SLC39A9Q9NUM3 307 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 SIP14410 1827 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 MOSPD3O75425 235 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 FAM209BQ5JX69 171 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 KIAA0895LQ68EN5 471 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 OR2A2Q6IF42 318 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 OR51H1Q8NH63 302 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 SGK3Q96BR1 496 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 PLK3Q9H4B4 646 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 CD207Q9UJ71 328 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 H3BP45 60 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 ADAM10O14672 748 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 HSD17B6O14756 317 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 SLC25A4P12235 298 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 APOBEC1P41238 236 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 ELLP55199 621 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 GRB2P62993 217 aaKnown RBP11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 JMJD6Q6NYC1 403 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 UNQ9370/PRO34162Q6UXP9 181 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 WDR5BQ86VZ2 330 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 MKXQ8IYA7 352 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF611Q8N823 705 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 UPK3AO75631 287 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 SMIM6P0DI80 62 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 FABP4P15090 132 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 TFAP2EQ6VUC0 442 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 Q7L0L9 218 aa11.74□□□□□ -0.53
TRAPPC9-201ENST00000389328 ARHGEF39Q8N4T4 335 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms