RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 NPY4RP50391 375 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 SOX8P57073 446 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 DRAM2Q6UX65 266 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 CDC20BQ86Y33 519 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 SHISA5Q8N114 240 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 OR10AC1Q8NH08 325 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 AIFM2Q9BRQ8 373 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 SCPEP1Q9HB40 452 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 BORCS7-ASMTA0A0B4J1R7 106 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 A0A0J9YW62 118 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 AQP7P3A6NL99 342 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 OR4C45A6NMZ5 311 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 FABP6P51161 128 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 FJX1Q86VR8 437 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF687Q8N1G0 1237 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 ABHD3Q8WU67 409 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 SMIM4Q8WVI0 70 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 PP6455Q8WZ26 134 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 VOPP1Q96AW1 172 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 HINT2Q9BX68 163 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 SIRT4Q9Y6E7 314 aaPredicted RBP12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 CD3DP04234 171 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 NFYAP23511 347 aaPredicted RBP12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 CAV2P51636 162 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 PRSS12P56730 875 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 CLDN20P56880 219 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 SNRPNP63162 240 aaKnown RBP12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 RNPS1Q15287 305 aaKnown RBP12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 BCL2A1Q16548 175 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 PABPC1L2AQ5JQF8 200 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 ZBTB37Q5TC79 503 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 SECTM1Q8WVN6 248 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 WDFY2Q96P53 400 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 PTTG3PQ9NZH4 202 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 IL17BQ9UHF5 180 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 SIGLEC5O15389 551 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 RECKO95980 971 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 CRYAAP02489 173 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 OPRM1P35372 400 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 PCOLCEQ15113 449 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 LTC4SQ16873 150 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 SPATA46Q5T0L3 261 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 DCUN1D4Q92564 292 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 TRMT61AQ96FX7 289 aaKnown RBP12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF385AQ96PM9 386 aaKnown RBP12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 FAM221AA4D161 298 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 ACSM4P0C7M7 580 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 TMEM91Q6ZNR0 172 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 GABRG1Q8N1C3 465 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 APOBEC4Q8WW27 367 aaKnown RBP12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 FOXJ3Q9UPW0 622 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF318Q5VUA4 2279 aa12.6□□□□□ -0.39
SHROOM1-203ENST00000378679 NPIPB9F8W1W9 429 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 SSX5O60225 188 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 MGMTP16455 207 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 GNB3P16520 340 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 EPHA1P21709 976 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 RAB35Q15286 201 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF546Q86UE3 836 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 HRASLSQ9HDD0 168 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 IGKV1D-42A0A075B6H8 117 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 A0A1W2PR80 420 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 SDCBPO00560 298 aaPredicted RBP12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 XRCC3O43542 346 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF133P52736 654 aaPredicted RBP12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 BTG1P62324 171 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF616Q08AN1 781 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF79Q15937 498 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 OR2M7Q8NG81 312 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 RDH5Q92781 318 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 EMG1Q92979 244 aaKnown RBP12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 DDA1Q9BW61 102 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 OR5V1Q9UGF6 321 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 GUCA2AQ02747 115 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 ACSM1Q08AH1 577 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 TEX261Q6UWH6 196 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 RFLNBQ8N5W9 214 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 SLC26A10Q8NG04 563 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 MAFIPQ8WZ33 124 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 SPIN2AQ99865 258 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 SPIN2BQ9BPZ2 258 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 HRH4Q9H3N8 390 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF275Q9NSD4 429 aaPredicted RBP12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 U3KQ87 197 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 MUC6Q6W4X9 2439 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 TANC1Q9C0D5 1861 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 SLC33A1O00400 549 aaPredicted RBP12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 CCSO14618 274 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 CRYABP02511 175 aaKnown RBP12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 DYRK1AQ13627 763 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 PAN3Q58A45 887 aaKnown RBP12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 OR51A2Q8NGJ7 313 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 ABHD1Q96SE0 405 aa12.59□□□□□ -0.39
SHROOM1-203ENST00000378679 TRAPPC2P0DI81 140 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 TRAPPC2BP0DI82 140 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 GLI4P10075 376 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 COX6A1P12074 109 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 CXCL3P19876 107 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 HAAOP46952 286 aa12.58□□□□□ -0.4
SHROOM1-203ENST00000378679 OR8G1Q15617 311 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms