RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 OR4A15Q8NGL6 344 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 RXFP2Q8WXD0 754 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 OR8D1Q8WZ84 308 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 CDS1Q92903 461 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 SPIN2AQ99865 258 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 GABRG3Q99928 467 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 SPIN2BQ9BPZ2 258 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 TBL1YQ9BQ87 522 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 OSBPL11Q9BXB4 747 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 C1orf198Q9H425 327 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 IFNKQ9P0W0 207 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 ZNF257Q9Y2Q1 563 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 HES2Q9Y543 173 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 TUBGCP6Q96RT7 1819 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 PLA2R1Q13018 1463 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 IGHV3-72A0A0B4J1Y9 119 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 A0A0B4J2E0 115 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 A0A1W2PRF3 423 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 A0A1W2PRM7 423 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 LCA5LO95447 670 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 PAHP00439 452 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 IGHV3-11P01762 117 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 DCNP07585 359 aaKnown RBP1.18□□□□□ -2.22
VPS13A-206ENST00000376646 ZNF286BP0CG31 522 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 THRAP10827 490 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 GFAPP14136 432 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 IFITM3Q01628 133 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 PIGHQ14442 188 aaPredicted RBP1.18□□□□□ -2.22
VPS13A-206ENST00000376646 OR1Q1Q15612 314 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 COX19Q49B96 90 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 TEX30Q5JUR7 227 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 CD300LGQ6UXG3 332 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 NDUFAF7Q7L592 441 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 SLC30A8Q8IWU4 369 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 DRAM1Q8N682 238 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 OR52K1Q8NGK4 314 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 OR13G1Q8NGZ3 307 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 SLC25A46Q96AG3 418 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 TMEM159Q96B96 161 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 KCNS1Q96KK3 526 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 OR4K3Q96R72 315 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 KCNS3Q9BQ31 491 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 RSPO3Q9BXY4 272 aaPredicted RBP1.18□□□□□ -2.22
VPS13A-206ENST00000376646 CHRNA10Q9GZZ6 450 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 TOLLIPQ9H0E2 274 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 ARMC7Q9H6L4 198 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 TDRD3Q9H7E2 651 aaKnown RBP1.18□□□□□ -2.22
VPS13A-206ENST00000376646 TMEM100Q9NV29 134 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 RHBDL2Q9NX52 303 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 ENOPH1Q9UHY7 261 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 CES1P1Q9UKY3 287 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 FLVCR2Q9UPI3 526 aa1.18□□□□□ -2.22
VPS13A-206ENST00000376646 FARSAQ9Y285 508 aaKnown RBP1.18□□□□□ -2.22
VPS13A-206ENST00000376646 ANKRD12Q6UB98 2062 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 AHDC1Q5TGY3 1603 aaPredicted RBP1.17□□□□□ -2.22
VPS13A-206ENST00000376646 A0A0A6YYD5 115 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 IGHV7-4-1A0A0J9YVY3 117 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 ZNF850A8MQ14 1090 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 M0R1X1 148 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 DFFAO00273 331 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 MANBAO00462 879 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 TAAR5O14804 337 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 CHMP2AO43633 222 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 ETHE1O95571 254 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 PTHP01270 115 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 TRBV12-3P01733 135 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 MT-ND4P03905 459 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 CD74P04233 296 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 CPN2P22792 545 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 APLNRP35414 380 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 ARL2P36404 184 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 CSKP41240 450 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 CARD18P57730 90 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 RPL18AQ02543 176 aaKnown RBP1.17□□□□□ -2.22
VPS13A-206ENST00000376646 NAB1Q13506 487 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 SLC25A35Q3KQZ1 300 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 NKAIN1Q4KMZ8 207 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 C6orf99Q4VX62 202 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 YIF1BQ5BJH7 314 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 C6orf183Q5T699 404 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 TMEM236Q5W0B7 351 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 KDM4DQ6B0I6 523 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 ASCL4Q6XD76 172 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 TMPRSS11AQ6ZMR5 421 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 Q6ZSR6 202 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 BHLHA15Q7RTS1 189 aaPredicted RBP1.17□□□□□ -2.22
VPS13A-206ENST00000376646 ARHGAP18Q8N392 663 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 ZNF615Q8N8J6 731 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 OR4M1Q8NGD0 313 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 OR9A2Q8NGT5 310 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 DCAKDQ8WVC6 231 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 FAM19A4Q96LR4 140 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 LINC00477Q96M19 166 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 RDH12Q96NR8 316 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 RNF157Q96PX1 679 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 TEAD3Q99594 435 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 DOK1Q99704 481 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 CHID1Q9BWS9 393 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 GAL3ST2Q9H3Q3 398 aa1.17□□□□□ -2.22
VPS13A-206ENST00000376646 KIR3DX1Q9H7L2 352 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms