RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 NUFIP1Q9UHK0 495 aaKnown RBP12.76□□□□□ -0.37
SMPDL3A-201ENST00000368440 SMIM31A0A1B0GVY4 71 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 DAPL1A0PJW8 107 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 METTL15A6NJ78 407 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 WNT9BO14905 357 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 TTRP02766 147 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 ACTC1P68032 377 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 ACTA1P68133 377 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 LOXL1Q08397 574 aaPredicted RBP12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 OR52I1Q8NGK6 324 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 CCL17Q92583 94 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 MUL1Q969V5 352 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 RNF166Q96A37 237 aaPredicted RBP12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 TMEM80Q96HE8 168 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 ADAT1Q9BUB4 502 aaKnown RBP12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 FAM192AQ9GZU8 254 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 RGCCQ9H4X1 137 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 ACOXLQ9NUZ1 547 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 SLC22A13Q9Y226 551 aa12.75□□□□□ -0.37
SMPDL3A-201ENST00000368440 LRP5LA4QPB2 252 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 ACOD1A6NK06 481 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 PPIHO43447 177 aaKnown RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 LY6G6DO95868 133 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 IGLV3-1P01715 115 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 USF1P22415 310 aaPredicted RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 PSMB10P40306 273 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 GPR6P46095 362 aaPredicted RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 GP2P55259 537 aaKnown RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 MAB21L1Q13394 359 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 OR8G1Q15617 311 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 OR8B8Q15620 311 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 AVPI1Q5T686 147 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 ACBD7Q8N6N7 88 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 OR51E1Q8TCB6 317 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 NARFLQ9H6Q4 476 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 MRPL15Q9P015 296 aaKnown RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 CLEC2DQ9UHP7 191 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 GNG8Q9UK08 70 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 OR52A1Q9UKL2 312 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 CEPT1Q9Y6K0 416 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 A0A0U1RQV5 110 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 SULT1C4O75897 302 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 IGHA1P01876 353 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 HSMCR30P0CW71 290 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 PIPP12273 146 aaPredicted RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 JUNBP17275 347 aaPredicted RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 CFL1P23528 166 aaKnown RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 IL2RGP31785 369 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 OR12D2P58182 307 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 HFEQ30201 348 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 CDONQ4KMG0 1287 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 BCL2L15Q5TBC7 163 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 PRAMEF6Q5VXH4 476 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 Q71RC1 249 aaPredicted RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 LHFPL3Q86UP9 236 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 ZNF420Q8TAQ5 688 aaPredicted RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 FAM71F1Q96KD3 344 aaPredicted RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 ZNF649Q9BS31 505 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 NAA50Q9GZZ1 169 aaKnown RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 GCM1Q9NP62 436 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 GPR84Q9NQS5 396 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 MRPS18AQ9NVS2 196 aaKnown RBP12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 RHBDD3Q9Y3P4 386 aa12.74□□□□□ -0.37
SMPDL3A-201ENST00000368440 TACSTD2P09758 323 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 TNFRSF1AP19438 455 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 DDOSTP39656 456 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 TMEM33P57088 247 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 RAB40BQ12829 278 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 MED22Q15528 200 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 BIVMQ86UB2 503 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 COMMD2Q86X83 199 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 CATSPERDQ86XM0 798 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 ELMOD2Q8IZ81 293 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 OR13F1Q8NGS4 319 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 RBM38Q9H0Z9 239 aaKnown RBP12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 MOB1AQ9H8S9 216 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 PPP1R3CQ9UQK1 317 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 PCDHGB1Q9Y5G3 927 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 ABCA2Q9BZC7 2435 aa12.73□□□□□ -0.37
SMPDL3A-201ENST00000368440 LOC100289279A0A1B0GTE1 492 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 P2RY10O00398 339 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 MRPS14O60783 128 aaKnown RBP12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 PMELP40967 661 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 CD200P41217 278 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 SRP9P49458 86 aaKnown RBP12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 MPPED2Q15777 294 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 ODF4Q2M2E3 257 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 TMEM249Q2WGJ8 235 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 KLHL22Q53GT1 634 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 CLEC9AQ6UXN8 241 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 FAM220AQ7Z4H9 259 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 MOGAT3Q86VF5 341 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 PRSS35Q8N3Z0 413 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 DGCR14Q96DF8 476 aaKnown RBP12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 C4orf36Q96KX1 117 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 OR5M11Q96RB7 305 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 ALG8Q9BVK2 526 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 ERVK13-1Q9NX77 482 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 NDUFA13Q9P0J0 144 aa12.72□□□□□ -0.37
SMPDL3A-201ENST00000368440 ZNF391Q9UJN7 358 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms