RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 PRDX4Q13162 271 aa13.43□□□□□ -0.26
LMX1B-201ENST00000355497 PARM1Q6UWI2 310 aa13.43□□□□□ -0.26
LMX1B-201ENST00000355497 MYPOPQ86VE0 399 aaPredicted RBP13.43□□□□□ -0.26
LMX1B-201ENST00000355497 AREGP15514 252 aa13.43□□□□□ -0.26
LMX1B-201ENST00000355497 RPS27P42677 84 aaKnown RBP13.43□□□□□ -0.26
LMX1B-201ENST00000355497 NHLH1Q02575 133 aa13.43□□□□□ -0.26
LMX1B-201ENST00000355497 NHLH2Q02577 135 aa13.43□□□□□ -0.26
LMX1B-201ENST00000355497 TMEM128Q5BJH2 165 aa13.43□□□□□ -0.26
LMX1B-201ENST00000355497 C11orf87Q6NUJ2 197 aa13.43□□□□□ -0.26
LMX1B-201ENST00000355497 RIMKLAQ8IXN7 391 aa13.43□□□□□ -0.26
LMX1B-201ENST00000355497 LYRM2Q9NU23 88 aaPredicted RBP13.43□□□□□ -0.26
LMX1B-201ENST00000355497 TMEM30CPA0ZSE6 113 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 FCMRO60667 390 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 RFC3P40938 356 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 Q56UQ5 140 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 STUMQ69YW2 141 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 DND1Q8IYX4 353 aaKnown RBP13.42□□□□□ -0.26
LMX1B-201ENST00000355497 KIAA1958Q8N8K9 716 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 CLDN23Q96B33 292 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 DUSP21Q9H596 190 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 ZNF576Q9H609 170 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 ZP3P21754 424 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 GALR1P47211 349 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 UBE2ZQ9H832 354 aaPredicted RBP13.42□□□□□ -0.26
LMX1B-201ENST00000355497 EPXP11678 715 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 TUSC1Q2TAM9 212 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 OR2G2Q8NGZ5 317 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 SMIM4Q8WVI0 70 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 TCRBV5S1A1TA0A578 114 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 SLC25A35Q3KQZ1 300 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 LRRC10Q5BKY1 277 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 OR1J1Q8NGS3 322 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 BSGP35613 385 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 PSMB2P49721 201 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 LINC00303Q3SY05 128 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 FAHD1Q6P587 224 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 TEX261Q6UWH6 196 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 SPPL3Q8TCT6 385 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 MS4A4AQ96JQ5 239 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 AKIP1Q9NQ31 210 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 B9D1Q9UPM9 204 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 U3KQ87 197 aa13.42□□□□□ -0.26
LMX1B-201ENST00000355497 DHHO43323 396 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 GYPAP02724 150 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 TRILQ7L0X0 811 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 OR4F17Q8NGA8 305 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 H3BP45 60 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 UPK1AO00322 258 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 POU2F2P09086 479 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 FPR2P25090 351 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 TMEM267Q0VDI3 215 aaPredicted RBP13.41□□□□□ -0.26
LMX1B-201ENST00000355497 ADPRHL1Q8NDY3 354 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 ADIPOR1Q96A54 375 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 MMP17Q9ULZ9 603 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 LOXL2Q9Y4K0 774 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 MYH15Q9Y2K3 1946 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 NDUFB3O43676 98 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 CAPZBP47756 277 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 CDC34P49427 236 aaPredicted RBP13.41□□□□□ -0.26
LMX1B-201ENST00000355497 GLDNQ6ZMI3 551 aaPredicted RBP13.41□□□□□ -0.26
LMX1B-201ENST00000355497 WBP2Q969T9 261 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 TMEM56Q96MV1 263 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 HDGFL3Q9Y3E1 203 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 SIGLEC1Q9BZZ2 1709 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 AKAP12Q02952 1782 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 ST6GAL1P15907 406 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 GUCA2AQ02747 115 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 GUK1Q16774 197 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 MIDNQ504T8 468 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 FFAR4Q5NUL3 377 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 TMPRSS11FQ6ZWK6 438 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 OR2V1Q8NHB1 315 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 CXCL16Q9H2A7 254 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 MMP26Q9NRE1 261 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 KLK11Q9UBX7 282 aa13.41□□□□□ -0.26
LMX1B-201ENST00000355497 ING1Q9UK53 422 aaPredicted RBP13.41□□□□□ -0.26
LMX1B-201ENST00000355497 A0A1B0GTQ1 180 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 CST7O76096 145 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 ONECUT2O95948 504 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 CSF2RBP32927 897 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 ACVR1Q04771 509 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 EXTL1Q92935 676 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 TMEM147Q9BVK8 224 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 OCIAD1Q9NX40 245 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 GZMKP49863 264 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 DEFB109BQ30KR1 87 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 ZNF66Q6ZN08 573 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 AKR7LQ8NHP1 331 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 KISS1RQ969F8 398 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-201ENST00000355497 APOBEC3DQ96AK3 386 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-201ENST00000355497 A4GNTQ9UNA3 340 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 C5orf52A6NGY3 159 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 SLC25A5P05141 298 aaKnown RBP13.4□□□□□ -0.26
LMX1B-201ENST00000355497 FAHP16930 419 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 NPY1RP25929 384 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 SUMO3P55854 103 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-201ENST00000355497 FOXF1Q12946 379 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 AGERQ15109 404 aa13.4□□□□□ -0.26
LMX1B-201ENST00000355497 MVB12AQ96EY5 273 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms