RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 MMP25Q9NPA2 562 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 RCL1Q9Y2P8 373 aaKnown RBP9.02□□□□□ -0.97
COL11A1-201ENST00000353414 LIPGQ9Y5X9 500 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 RNASEK-C17orf49H0YIS7 233 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 ABCD3P28288 659 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 HNRNPA3P51991 378 aaKnown RBP9.02□□□□□ -0.97
COL11A1-201ENST00000353414 MRPS10P82664 201 aaKnown RBP9.02□□□□□ -0.97
COL11A1-201ENST00000353414 ZNF239Q16600 458 aaKnown RBP9.02□□□□□ -0.97
COL11A1-201ENST00000353414 ZNF528Q3MIS6 628 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 TMEM52BQ4KMG9 183 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 RNF141Q8WVD5 230 aa9.02□□□□□ -0.97
COL11A1-201ENST00000353414 C11orf54Q9H0W9 315 aaPredicted RBP9.02□□□□□ -0.97
COL11A1-201ENST00000353414 STRAPQ9Y3F4 350 aaKnown RBP9.02□□□□□ -0.97
COL11A1-201ENST00000353414 KNTC1P50748 2209 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 H0YIV9 168 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CCR2P41597 374 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 GUCA2AQ02747 115 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 PDZK1IP1Q13113 114 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 ACOT6Q3I5F7 207 aaPredicted RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 PRSS35Q8N3Z0 413 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 ADPRHL1Q8NDY3 354 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CEPT1Q9Y6K0 416 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 TRIP12Q14669 1992 aaPredicted RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CLEC18AA5D8T8 446 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 HMGN4O00479 90 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 AQP8O94778 261 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 SNRPCP09234 159 aaKnown RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 PSMB1P20618 241 aaKnown RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 SLC35E4Q6ICL7 350 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 C1orf210Q8IVY1 113 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CLEC18CQ8NCF0 446 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 OR13D1Q8NGV5 346 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 SLC26A1Q9H2B4 701 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 AAMDCQ9H7C9 122 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 PARD6AQ9NPB6 346 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CNOT2Q9NZN8 540 aaKnown RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 GDF2Q9UK05 429 aaPredicted RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CST7O76096 145 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 SCG5P05408 212 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CTSLP07711 333 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 OR4C3Q8NH37 302 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 OXGR1Q96P68 337 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 OR51I2Q9H344 312 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 B3GALT5Q9Y2C3 310 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 NHSQ6T4R5 1651 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 POLR2AP24928 1970 aaKnown RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 ACOT8O14734 319 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 IL9P15248 144 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CR2P20023 1033 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 B3GNTL1Q67FW5 361 aaPredicted RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CYHR1Q6ZMK1 362 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 MARCH1Q8TCQ1 289 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 ITPKCQ96DU7 683 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 POM121Q96HA1 1249 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 LRRC61Q9BV99 259 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 ACTR3CQ9C0K3 210 aaPredicted RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CSNK1G1Q9HCP0 422 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 AP5S1Q9NUS5 200 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 SLCO1C1Q9NYB5 712 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 A0A1W2PNV4 684 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 UMAD1C9J7I0 102 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 IL5P05113 134 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 SULT1A2P50226 295 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 TAAR6Q96RI8 345 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 DAPP1Q9UN19 280 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CORINQ9Y5Q5 1042 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 ZNF727A8MUV8 499 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 DUS4LO95620 317 aaKnown RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CELA2BP08218 269 aaPredicted RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 EPHA2P29317 976 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 PSMB2P49721 201 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 LIMK1P53667 647 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 SRPXP78539 464 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 ALKAL1Q6UXT8 129 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 BCL7CQ8WUZ0 217 aaPredicted RBP9.01□□□□□ -0.97
COL11A1-201ENST00000353414 MYEOVQ96EZ4 313 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 POM121L2Q96KW2 1035 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 PSG11Q9UQ72 335 aa9.01□□□□□ -0.97
COL11A1-201ENST00000353414 CGB1A6NKQ9 187 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 METTL12A8MUP2 240 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 ZNF354AO60765 605 aaPredicted RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 ALPLP05186 524 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 TAS2R45P59539 299 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 SNRPGP62308 76 aaKnown RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 TNFAIP6P98066 277 aaPredicted RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 LSRQ86X29 649 aaPredicted RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 DDX51Q8N8A6 666 aaKnown RBP eCLIP9□□□□□ -0.97
COL11A1-201ENST00000353414 ZNF764Q96H86 408 aaPredicted RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 GAR1Q9NY12 217 aaKnown RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 ADAM29Q9UKF5 820 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 ASXL3Q9C0F0 2248 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 ANKRD36CQ5JPF3 1778 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 OXA1LQ15070 435 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 HMGN3Q15651 99 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 FAHD2BQ6P2I3 314 aaPredicted RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 RNASEKQ6P5S7 137 aaKnown RBP9□□□□□ -0.97
COL11A1-201ENST00000353414 ZNF620Q6ZNG0 422 aa9□□□□□ -0.97
COL11A1-201ENST00000353414 ADIPOR1Q96A54 375 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms