RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 POLR2IP36954 125 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 MPPED2Q15777 294 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 ZNF404Q494X3 552 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 MEDAGQ5VYS4 303 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 BTNL3Q6UXE8 466 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 DCDC5Q6ZRR9 648 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 ZBTB49Q6ZSB9 765 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 KCTD8Q6ZWB6 473 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 CBR4Q8N4T8 237 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 RFLNBQ8N5W9 214 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 OR8B12Q8NGG6 310 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 NANPQ8TBE9 248 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 DVL3Q92997 716 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 HRASLS5Q96KN8 279 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 SSBP3Q9BWW4 388 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 TTTY10Q9BZA0 68 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 PBOV1Q9GZY1 135 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 OCEL1Q9H607 264 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 METTL17Q9H7H0 456 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 RNPEPL1Q9HAU8 725 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 ADGRL4Q9HBW9 690 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 G6PC2Q9NQR9 355 aa13.24□□□□□ -0.29
TSPAN4-201ENST00000346501 ZNF816-ZNF321PA0A0X1KG74 233 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 TMEM210A6NLX4 147 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 LGALS8O00214 317 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 MPZL2O60487 215 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 PTBP3O95758 552 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 WNT2P09544 360 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 RIPPLY1Q0D2K3 151 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 PRDX4Q13162 271 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 ZIK1Q3SY52 487 aaPredicted RBP13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 BCL2L15Q5TBC7 163 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 FAM220AQ7Z4H9 259 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 GALNT4Q8N4A0 578 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 YIPF7Q8N8F6 280 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 DEFB108BQ8NET1 73 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 SEMA6DQ8NFY4 1073 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 OR10H4Q8NGA5 316 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 PIGCQ92535 297 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 MRPL48Q96GC5 212 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 TMEM246Q9BRR3 403 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 FAM206AQ9NX38 181 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 ZNF319Q9P2F9 582 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 ERVK-18Q9QC07 812 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 CLN8Q9UBY8 286 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 NUFIP1Q9UHK0 495 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 COPS3Q9UNS2 423 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 RHBDD3Q9Y3P4 386 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 GMPPBQ9Y5P6 360 aa13.23□□□□□ -0.29
TSPAN4-201ENST00000346501 RNF212BA8MTL3 300 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 TCF21O43680 179 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 CST4P01036 141 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 PMELP40967 661 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 PITPNBP48739 271 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 NPY4RP50391 375 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 PLEKHG7Q6ZR37 379 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 ZDHHC23Q8IYP9 409 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 ZNF418Q8TF45 676 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 RNF170Q96K19 258 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 Q96MT0 163 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 TBX5Q99593 518 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 APOL4Q9BPW4 351 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 ADI1Q9BV57 179 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 POLR3KQ9Y2Y1 108 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 PCDHGB1Q9Y5G3 927 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 SNX5Q9Y5X3 404 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 R4GMQ9 66 aa13.22□□□□□ -0.29
TSPAN4-201ENST00000346501 OOEPA6NGQ2 149 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 ZNF850A8MQ14 1090 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 A8MXK9 166 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 F5H0A9 414 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 PHF1O43189 567 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 ANOS1P23352 680 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 MTNR1AP48039 350 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 ACTC1P68032 377 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 ACTA1P68133 377 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 ZSCAN26Q16670 478 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 MICBQ29980 383 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 ARMCX4Q5H9R4 360 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 FAM201AQ5SY85 155 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 ZBTB37Q5TC79 503 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 CD276Q5ZPR3 534 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 SFRP4Q6FHJ7 346 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 OR1M1Q8NGA1 313 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 OR51E1Q8TCB6 317 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 LRRC29Q8WV35 223 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 FAM71F1Q96KD3 344 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 GPR84Q9NQS5 396 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 ENPP5Q9UJA9 477 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 OR52A1Q9UKL2 312 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 AUP1Q9Y679 476 aa13.21□□□□□ -0.29
TSPAN4-201ENST00000346501 A0A0A6YYJ9 748 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 METTL15A6NJ78 407 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 C3orf80F5H4A9 247 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 SULT1C4O75897 302 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 DHRS3O75911 302 aa13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 RPP14O95059 124 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-201ENST00000346501 FPR2P25090 351 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms