RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 FCRL6Q6DN72 434 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 DCXRQ7Z4W1 244 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 OR4B1Q8NGF8 309 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.35□□□□□ -0.43
TRIO-202ENST00000344204 MAP1LC3B2A6NCE7 125 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 CHRNA7P36544 502 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 CD96P40200 585 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 LIM2P55344 173 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 C19orf43Q9BQ61 176 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 MAP1LC3BQ9GZQ8 125 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 SLC6A13Q9NSD5 602 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 FAM78BQ5VT40 261 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 PLPP4Q5VZY2 271 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 GKN2Q86XP6 184 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 VN1R17PQ8TDU5 208 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 FBLIM1Q8WUP2 373 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 ICOSLGO75144 302 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 PLP1P60201 277 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 PLPP6Q8IY26 295 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 OR5B3Q8NH48 314 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 ALKBH7Q9BT30 221 aaPredicted RBP12.35□□□□□ -0.43
TRIO-202ENST00000344204 CA10Q9NS85 328 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 ZNF840PA6NDX5 716 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 CTAG2O75638 210 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 GJB5O95377 273 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 PFN3P60673 137 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRIO-202ENST00000344204 LYRM7Q5U5X0 104 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 DOK2O60496 412 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 BMP5P22003 454 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 NPSR1Q6W5P4 371 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 TMEM64Q6YI46 380 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 GPR32P1Q8NGA4 272 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 FZD6O60353 706 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 EMC4Q5J8M3 183 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 THEM4Q5T1C6 240 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 FA2HQ7L5A8 372 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 BLNKQ8WV28 456 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 FAM3BP58499 235 aaPredicted RBP12.35□□□□□ -0.43
TRIO-202ENST00000344204 HDAC8Q9BY41 377 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 ANGPTL4Q9BY76 406 aa12.35□□□□□ -0.43
TRIO-202ENST00000344204 COL2A1P02458 1487 aaPredicted RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 LANCL1O43813 399 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 SLC25A6P12236 298 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 NAAAQ02083 359 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 ELAVL3Q14576 367 aaKnown RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 OR1P1Q8NH06 330 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 TM4SF18Q96CE8 201 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 ACY3Q96HD9 319 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 NUDT16L1Q9BRJ7 211 aaKnown RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 IGKV6-21A0A0C4DH24 114 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 PPOXP50336 477 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 UBE2G2P60604 165 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 THAP3Q8WTV1 239 aaPredicted RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 FBXO34Q9NWN3 711 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 DBHP09172 617 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 OR10J4P0C629 311 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 IQCF3P0C7M6 154 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 C8orf82Q6P1X6 216 aaPredicted RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 HSD17B8Q92506 261 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 SLX1AQ9BQ83 275 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 OR1A1Q9P1Q5 309 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 A0A0G2JLL6 359 aaPredicted RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 MED19A0JLT2 244 aaPredicted RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 PRRT2Q7Z6L0 340 aaPredicted RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 OR10J5Q8NHC4 309 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 POU3F1Q03052 451 aaPredicted RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 A0A1W2PRU2 124 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 BLACEA4D250 179 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 KLK3P07288 261 aaPredicted RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 MRPL21Q7Z2W9 205 aaKnown RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 MANBALQ9NQG1 85 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 HSF4Q9ULV5 492 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 COL24A1Q17RW2 1714 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 HEPACAM2A8MVW5 462 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 SLC17A2O00624 439 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 CRISP2P16562 243 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 OR1D4P47884 311 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 LIPGQ9Y5X9 500 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 NKAIN4Q8IVV8 208 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 OR10P1Q8NGE3 313 aa12.34□□□□□ -0.43
TRIO-202ENST00000344204 LIN7CQ9NUP9 197 aaKnown RBP12.34□□□□□ -0.43
TRIO-202ENST00000344204 SMAD6O43541 496 aaKnown RBP12.33□□□□□ -0.43
TRIO-202ENST00000344204 WNT11O96014 354 aa12.33□□□□□ -0.43
TRIO-202ENST00000344204 SCAND1P57086 179 aa12.33□□□□□ -0.43
TRIO-202ENST00000344204 TMEM33P57088 247 aa12.33□□□□□ -0.43
TRIO-202ENST00000344204 MSL2Q9HCI7 577 aa12.33□□□□□ -0.43
TRIO-202ENST00000344204 SBF1O95248 1867 aa12.33□□□□□ -0.44
TRIO-202ENST00000344204 ATP5SQ99766 215 aa12.33□□□□□ -0.44
TRIO-202ENST00000344204 ANAPC1Q9H1A4 1944 aa12.33□□□□□ -0.44
TRIO-202ENST00000344204 ING1Q9UK53 422 aaPredicted RBP12.33□□□□□ -0.44
TRIO-202ENST00000344204 H3BML4 177 aa12.33□□□□□ -0.44
TRIO-202ENST00000344204 ACTL6BO94805 426 aa12.33□□□□□ -0.44
TRIO-202ENST00000344204 DLX2Q07687 328 aaPredicted RBP12.33□□□□□ -0.44
TRIO-202ENST00000344204 MISPQ8IVT2 679 aa12.33□□□□□ -0.44
TRIO-202ENST00000344204 DHCR7Q9UBM7 475 aaKnown RBP12.33□□□□□ -0.44
TRIO-202ENST00000344204 RPS21P63220 83 aaKnown RBP12.33□□□□□ -0.44
TRIO-202ENST00000344204 SLC35E3Q7Z769 313 aa12.33□□□□□ -0.44
TRIO-202ENST00000344204 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.33□□□□□ -0.44
TRIO-202ENST00000344204 FIGNL2A6NMB9 653 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms