RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TMEM47Q9BQJ4 181 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 F8VVB4 439 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 F8VWA3 439 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 C8orf89P0DMQ9 161 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 FDXRP22570 491 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ANOS1P23352 680 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ARRDC1Q8N5I2 433 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 OR51S1Q8NGJ8 323 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 SLCO4A1Q96BD0 722 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 MS4A3Q96HJ5 214 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RSRP1Q9BUV0 290 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 LINC00597Q9H2U6 94 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 GCM1Q9NP62 436 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RBPJLQ9UBG7 517 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 PPT2Q9UMR5 302 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 HBZP02008 142 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RPS4Y1P22090 263 aaKnown RBP3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CFPP27918 469 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 CDKN2DP55273 166 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 C6orf136Q5SQH8 315 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 OR2Y1Q8NGV0 311 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 RABGGTBP53611 331 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 PRSS8Q16651 343 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 Q6ZS92 163 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 PAAF1Q9BRP4 392 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 TPSD1Q9BZJ3 242 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 ANXA10Q9UJ72 324 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 V9GYH0 126 aa3.42□□□□□ -1.86
SYNE2-202ENST00000344113 PLA2G10O15496 165 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 FPGSQ05932 587 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF543Q08ER8 600 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 HLA-DRB5Q30154 266 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 SLC25A34Q6PIV7 304 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 NUFIP2Q7Z417 695 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ARHGEF39Q8N4T4 335 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OR2A1Q8NGT9 310 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 GUCD1Q96NT3 240 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PRO1933Q9H354 126 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 MRPL17Q9NRX2 175 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 DNAJC27Q9NZQ0 273 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 F8P00451 2351 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 TMX2-CTNND1H3BSU7 103 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 RPL36A-HNRNPH2H7BZ11 118 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 B3GALT2O43825 422 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 NDUFB6O95139 128 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CILP2Q8IUL8 1156 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 LRRC29Q8WV35 223 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 GRAMD2BQ96HH9 432 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 LRRIQ1Q96JM4 1722 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OR2J3O76001 311 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 SLC35G6P0C7Q6 338 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 DRD5P21918 477 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 AQP1P29972 269 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 AGFG1P52594 562 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CATR1Q13166 79 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM128Q5BJH2 165 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CTU1Q7Z7A3 348 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 EAF1Q96JC9 268 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 TBL2Q9Y4P3 447 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 TSPAN13O95857 204 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 VN1R17PQ8TDU5 208 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 HSD17B14Q9BPX1 270 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 AMBNQ9NP70 447 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 FFAR2O15552 330 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 SLC6A12P48065 614 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PARS2Q7L3T8 475 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ATOH7Q8N100 152 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CRISPLD2Q9H0B8 497 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CRYM-AS1A6NIL9 109 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 WNT3P56703 355 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 MRPS11P82912 194 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CPSF6Q16630 551 aaKnown RBP eCLIP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 LYPD4Q6UWN0 246 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CEACAM20Q6UY09 585 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ABHD1Q96SE0 405 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 HSPB9Q9BQS6 159 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 F5P12259 2224 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 TCRBV5S2A0A599 114 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 G3V2L1 256 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 FAM157BP0CG42 384 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OR1E2P47887 323 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 RFX5P48382 616 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 DNAJC5GQ8N7S2 189 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 FGF19O95750 216 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 WNT11O96014 354 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 MAS1P04201 325 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CCR8P51685 355 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF85Q03923 595 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 FBLN7Q53RD9 439 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 SLC36A1Q7Z2H8 476 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OR4A16Q8NH70 328 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OR51E1Q8TCB6 317 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 THAP3Q8WTV1 239 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 GOLGA2P5Q9HBQ8 144 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 DNAJC4Q9NNZ3 241 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ELOVL5Q9NYP7 299 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 IGHV2-70DA0A0C4DH43 119 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 TCRBV7S2A1N4TA0A589 114 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 LINC01549A6NIU2 74 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 VENTXO95231 258 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms