RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SARAFQ96BY9 339 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 MS4A3Q96HJ5 214 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 C7orf50Q9BRJ6 194 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 BEX2Q9BXY8 128 aa19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 DSPP15924 2871 aaKnown RBP19.48■□□□□ 0.71
PDLIM2-203ENST00000339162 METTL21EPA6NDL7 271 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 TMEM14DPA8MWL7 114 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 SS18L1O75177 396 aaPredicted RBP19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 TPPPO94811 219 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 MPIG6BO95866 241 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 PRF1P14222 555 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 STOMP27105 288 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 MPGP29372 298 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 FAM3AP98173 230 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 RIPPLY1Q0D2K3 151 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 SLC22A6Q4U2R8 563 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 CNEP1R1Q8N9A8 125 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 CHST4Q8NCG5 386 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 OR1K1Q8NGR3 316 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 CYYR1Q96J86 154 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 GSTT2BP0CG30 244 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 GSK3AP49840 483 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 CAPZA1P52907 286 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 TBRG1Q3YBR2 411 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 ZNF584Q8IVC4 421 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 OR4D10Q8NGI6 311 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 OR10K1Q8NGX5 313 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 OR8S1Q8NH09 359 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 DVL3Q92997 716 aaPredicted RBP19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 SEH1LQ96EE3 360 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 C1QTNF5Q9BXJ0 243 aa19.47■□□□□ 0.71
PDLIM2-203ENST00000339162 EIF2S3P41091 472 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-203ENST00000339162 ZNF585AQ6P3V2 769 aa19.46■□□□□ 0.71
PDLIM2-203ENST00000339162 RBMXL3Q8N7X1 1067 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-203ENST00000339162 C9orf106Q8NAJ2 232 aa19.46■□□□□ 0.71
PDLIM2-203ENST00000339162 OR6F1Q8NGZ6 308 aa19.46■□□□□ 0.71
PDLIM2-203ENST00000339162 BEX1Q9HBH7 125 aa19.46■□□□□ 0.71
PDLIM2-203ENST00000339162 GP6Q9HCN6 339 aa19.46■□□□□ 0.71
PDLIM2-203ENST00000339162 PLSCR2Q9NRY7 297 aa19.46■□□□□ 0.71
PDLIM2-203ENST00000339162 FLVCR2Q9UPI3 526 aa19.46■□□□□ 0.71
PDLIM2-203ENST00000339162 hCG_38984A0A1B0GV85 526 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 A0A1W2PR80 420 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 HMX3A6NHT5 357 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 CRTAPO75718 401 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 PTGFRP43088 359 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 Q6ZS92 163 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 GPX8Q8TED1 209 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 ING4Q9UNL4 249 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 NUBP2Q9Y5Y2 271 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 FAM230AA0A1W2PPH8 454 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 HOXD11P31277 338 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 TFAP2EQ6VUC0 442 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 Q6ZTK2 550 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 FAM214BQ7L5A3 538 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 CDH26Q8IXH8 852 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 PNLDC1Q8NA58 520 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 TNFAIP8L1Q8WVP5 186 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 BCL2L2Q92843 193 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 C10orf35Q96D05 121 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 LPAR5Q9H1C0 372 aa19.45■□□□□ 0.7
PDLIM2-203ENST00000339162 A0A0A6YYD4 124 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 CDC14BO60729 498 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 GTF2F2P13984 249 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 GNB3P16520 340 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 ARR3P36575 388 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 NKX2-5P52952 324 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 SELENOIQ9C0D9 397 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 MAP1BP46821 2468 aaKnown RBP19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 A0A0A6YYJ9 748 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 PLATP00750 562 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 NGFP01138 241 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 PLEKHN1Q494U1 663 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 CDNFQ49AH0 187 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 VWA1Q6PCB0 445 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 COLCA1Q6ZS62 124 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 CCDC54Q8NEL0 328 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 ST6GAL2Q96JF0 529 aa19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 ELL3Q9HB65 397 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-203ENST00000339162 RAD51DO75771 328 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 LYZL6O75951 148 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 CD3DP04234 171 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 HLA-DMAP28067 261 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 MTCP1P56278 107 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 FOXF2Q12947 444 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 HLXQ14774 488 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 TSC22D1Q15714 1073 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 GSG1Q2KHT4 349 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 ZNF260Q3ZCT1 412 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 ATAD3CQ5T2N8 411 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 SPACA3Q8IXA5 215 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 NAXEQ8NCW5 288 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 OR4C16Q8NGL9 310 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 KCNG3Q8TAE7 436 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 DMRTB1Q96MA1 342 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 TMEM59Q9BXS4 323 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 OR10A4Q9H209 315 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 OR51B6Q9H340 312 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 LHX6Q9UPM6 363 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 A0A0A6YYH2 397 aa19.43■□□□□ 0.7
PDLIM2-203ENST00000339162 A6NJ64 397 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms