RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 TFAP2EQ6VUC0 442 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 ZNF101Q8IZC7 436 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 OR2AE1Q8NHA4 323 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 APOBEC3DQ96AK3 386 aaPredicted RBP9.21□□□□□ -0.93
CLP1-201ENST00000302731 SEH1LQ96EE3 360 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 TAAR6Q96RI8 345 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 CST11Q9H112 138 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 LPAR5Q9H1C0 372 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 OPA3Q9H6K4 179 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 C12orf49Q9H741 205 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 ALG5Q9Y673 324 aa9.21□□□□□ -0.93
CLP1-201ENST00000302731 LOC100509620A0A075B734 347 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 CDC14BO60729 498 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 MT-ND4P03905 459 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 H2AFB2P0C5Z0 115 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 EDN3P14138 238 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 STOMP27105 288 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 OR3A4PP47883 348 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 EIF2B2P49770 351 aaKnown RBP9.2□□□□□ -0.94
CLP1-201ENST00000302731 ZNF92Q03936 586 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 TNK1Q13470 666 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 PCGF3Q3KNV8 242 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 C9orf135Q5VTT2 229 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 TNRC6AQ8NDV7 1962 aaKnown RBP9.2□□□□□ -0.94
CLP1-201ENST00000302731 OR10R2Q8NGX6 335 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 UBASH3BQ8TF42 649 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 POM121L2Q96KW2 1035 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 TRIB1Q96RU8 372 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 URM1Q9BTM9 101 aaKnown RBP9.2□□□□□ -0.94
CLP1-201ENST00000302731 REPIN1Q9BWE0 567 aaKnown RBP9.2□□□□□ -0.94
CLP1-201ENST00000302731 TMEM59Q9BXS4 323 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 ARHGAP21Q5T5U3 1957 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 FREM2Q5SZK8 3169 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 ZNF816-ZNF321PA0A0X1KG74 233 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 J3QW42 95 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 GMDSO60547 372 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 GFRA3O60609 400 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 PRAF2O60831 178 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 CRYABP02511 175 aaKnown RBP9.2□□□□□ -0.94
CLP1-201ENST00000302731 GSTP1P09211 210 aaKnown RBP9.2□□□□□ -0.94
CLP1-201ENST00000302731 AKAIN1P0CW23 69 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 CD79AP11912 226 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 MECP2P51608 486 aaKnown RBP9.2□□□□□ -0.94
CLP1-201ENST00000302731 CCR6P51684 374 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 RAB25P57735 213 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 TAS2R19P59542 299 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 RRAS2P62070 204 aaPredicted RBP9.2□□□□□ -0.94
CLP1-201ENST00000302731 FOXC1Q12948 553 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 ARL6IP1Q15041 203 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 GSG1Q2KHT4 349 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 MOGAT2Q3SYC2 334 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 ACSF3Q4G176 576 aaPredicted RBP9.2□□□□□ -0.94
CLP1-201ENST00000302731 NSUN5P2Q63ZY6 315 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 Q6ZTK2 550 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 LHFPL2Q6ZUX7 228 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 FAM89BQ8N5H3 189 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 TMEM229BQ8NBD8 167 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 ACBD4Q8NC06 268 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 STEAP2Q8NFT2 490 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 OR56B1Q8NGI3 324 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 OR6K3Q8NGY3 331 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 ST6GAL2Q96JF0 529 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 SPACA5Q96QH8 159 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 KCNN3Q9UGI6 736 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 ZNF221Q9UK13 617 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 WASF3Q9UPY6 502 aa9.2□□□□□ -0.94
CLP1-201ENST00000302731 FREM1Q5H8C1 2179 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 ZFHX2Q9C0A1 2572 aaPredicted RBP9.19□□□□□ -0.94
CLP1-201ENST00000302731 ZNF503-AS2A6NEH8 195 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 MKRN2OSH3BPM6 223 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 PEX14O75381 377 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 MPIG6BO95866 241 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 NRASP01111 189 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 RCVRNP35243 200 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 PTGER4P35408 488 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 APLNRP35414 380 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 FUT6P51993 359 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 ZP1P60852 638 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 RPS27AP62979 156 aaKnown RBP9.19□□□□□ -0.94
CLP1-201ENST00000302731 GUCA2AQ02747 115 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 MALLQ13021 153 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 PNLIPRP3Q17RR3 467 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 EIF2S3LQ2VIR3 472 aaKnown RBP9.19□□□□□ -0.94
CLP1-201ENST00000302731 TBRG1Q3YBR2 411 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 TMEM255AQ5JRV8 349 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 ASCL4Q6XD76 172 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 Q6ZT83 130 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 RNF144BQ7Z419 303 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 RBMXL3Q8N7X1 1067 aaKnown RBP9.19□□□□□ -0.94
CLP1-201ENST00000302731 TMEM104Q8NE00 496 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 C1orf162Q8NEQ5 155 aaPredicted RBP9.19□□□□□ -0.94
CLP1-201ENST00000302731 TNFAIP8L1Q8WVP5 186 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 PIGTQ969N2 578 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 S100A13Q99584 98 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 SCNM1Q9BWG6 230 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 TM2D1Q9BX74 207 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 C20orf85Q9H1P6 137 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 GHITMQ9H3K2 345 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 NOX3Q9HBY0 568 aa9.19□□□□□ -0.94
CLP1-201ENST00000302731 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms