RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 TAAR9Q96RI9 348 aa13.33□□□□□ -0.28
SEC16A-202ENST00000290037 SLC35B3Q9H1N7 401 aa13.33□□□□□ -0.28
SEC16A-202ENST00000290037 NPY4RP50391 375 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 LRRC18Q8N456 261 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 ZNF2Q9BSG1 426 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-202ENST00000290037 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-202ENST00000290037 TRAV17A0A0B4J275 112 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 FABP5Q01469 135 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 IL24Q13007 206 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 PLPP7Q8NBV4 271 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 COX14Q96I36 57 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 SIRT3Q9NTG7 399 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-202ENST00000290037 FBXO34Q9NWN3 711 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 CLEC2DQ9UHP7 191 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 RPL35P42766 123 aaKnown RBP13.32□□□□□ -0.28
SEC16A-202ENST00000290037 NAAAQ02083 359 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 LILRB1Q8NHL6 650 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-202ENST00000290037 TBC1D29Q9UFV1 150 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 SLC6A1P30531 599 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 PRAMEF5Q5TYX0 476 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 PRAMEF6Q5VXH4 476 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 OR1L4Q8NGR5 311 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 ASH2LQ9UBL3 628 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 MYOFQ9NZM1 2061 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 SMAD9O15198 467 aaKnown RBP13.32□□□□□ -0.28
SEC16A-202ENST00000290037 TRAF3IP2O43734 574 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-202ENST00000290037 PPP1CBP62140 327 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 VMA21Q3ZAQ7 101 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 BOLLQ8N9W6 283 aaKnown RBP13.32□□□□□ -0.28
SEC16A-202ENST00000290037 BPIFCQ8NFQ6 507 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 AUNIPQ9H7T9 357 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 GDF2Q9UK05 429 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-202ENST00000290037 ERVFC1P60507 584 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 ADIRFQ15847 76 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 NPRL2Q8WTW4 380 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 MED20Q9H944 212 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 PCOLCE2Q9UKZ9 415 aa13.32□□□□□ -0.28
SEC16A-202ENST00000290037 C21orf140B9A014 251 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 ALOX5APP20292 161 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 HTRA4P83105 476 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-202ENST00000290037 PTCRAQ6ISU1 281 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-202ENST00000290037 WNT16Q9UBV4 365 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 PRSS42Q7Z5A4 293 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 RTN4IP1Q8WWV3 396 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A10PA6NDY2 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A18PA6NE21 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A16PA6NEW6 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A20PA6NIJ5 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A8PA6NJQ4 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A7PA6NKC0 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A22PA8MWA6 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A12PA8MX19 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A5PA8MXJ8 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A23PA8MXZ1 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A15PP0C7V4 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A13PP0C7W8 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A14PP0C7W9 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FAM90A24PP0C7X0 464 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 TBPL2Q6SJ96 375 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 OR6C3Q9NZP0 311 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 SEBOXQ9HB31 216 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-202ENST00000290037 OR6C68A6NDL8 312 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 CDS2O95674 445 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 SEMG1P04279 462 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 SSTR2P30874 369 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 CCSMST1Q4G0I0 132 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 MFRPQ9BY79 579 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 M0QZ24 198 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 CCR6P51684 374 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 LRRC10Q5BKY1 277 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 ZNF787Q6DD87 383 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 LHX4Q969G2 390 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 MARVELD3Q96A59 401 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 NAA50Q9GZZ1 169 aaKnown RBP13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FGF22Q9HCT0 170 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 MYOZ1Q9NP98 299 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-202ENST00000290037 ZNF727A8MUV8 499 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 H3BSH0 61 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 FGF17O60258 216 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 PEX11BO96011 259 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 PIGPP57054 158 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 MARCH3Q86UD3 253 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 OR10X1Q8NGY0 326 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 RPS4Y2Q8TD47 263 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 WBP2Q969T9 261 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 OR2A5Q96R48 311 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 TAAR3PQ9P1P4 343 aa13.31□□□□□ -0.28
SEC16A-202ENST00000290037 ZNF724A8MTY0 619 aa13.3□□□□□ -0.28
SEC16A-202ENST00000290037 J3QW42 95 aa13.3□□□□□ -0.28
SEC16A-202ENST00000290037 DHHO43323 396 aa13.3□□□□□ -0.28
SEC16A-202ENST00000290037 HRH1P35367 487 aa13.3□□□□□ -0.28
SEC16A-202ENST00000290037 RNF4P78317 190 aa13.3□□□□□ -0.28
SEC16A-202ENST00000290037 HOXD11P31277 338 aaPredicted RBP13.3□□□□□ -0.28
SEC16A-202ENST00000290037 KIAA0141Q14154 515 aaPredicted RBP13.3□□□□□ -0.28
SEC16A-202ENST00000290037 PRTGQ2VWP7 1150 aa13.3□□□□□ -0.28
SEC16A-202ENST00000290037 NLGN4YQ8NFZ3 816 aaPredicted RBP13.3□□□□□ -0.28
SEC16A-202ENST00000290037 ATP5SQ99766 215 aa13.3□□□□□ -0.28
SEC16A-202ENST00000290037 NXF5Q9H1B4 397 aaKnown RBP13.3□□□□□ -0.28
SEC16A-202ENST00000290037 TSC2P49815 1807 aa13.3□□□□□ -0.28
SEC16A-202ENST00000290037 TMEM210A6NLX4 147 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms