RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 RTN4RL2Q86UN3 420 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 ZDHHC22Q8N966 263 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 SUMF1Q8NBK3 374 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 S100PBPQ96BU1 408 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 ZNF304Q9HCX3 659 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 EFSO43281 561 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 NUDT21O43809 227 aaKnown RBP11.93□□□□□ -0.5
SCAF4-201ENST00000286835 ARG1P05089 322 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 CX3CR1P49238 355 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 ZNF345Q14585 488 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 CLINT1Q14677 625 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 C14orf28Q4W4Y0 310 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 ZSCAN4Q8NAM6 433 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-201ENST00000286835 TMEM104Q8NE00 496 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 OR56B1Q8NGI3 324 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 ASB13Q8WXK3 278 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 HOXB13Q92826 284 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-201ENST00000286835 RBM24Q9BX46 236 aaKnown RBP11.93□□□□□ -0.5
SCAF4-201ENST00000286835 RTN4RQ9BZR6 473 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 OR10A2Q9H208 303 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 ZNF160Q9HCG1 818 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 AMDHD2Q9Y303 409 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 RAB27BO00194 218 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 TLX3O43711 291 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-201ENST00000286835 NXPH3O95157 252 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 POU2F2P09086 479 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 BCKDHBP21953 392 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 CALCRP30988 508 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 OTX2P32243 289 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 FABP9Q0Z7S8 132 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 PDZD11Q5EBL8 140 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 LANCL3Q6ZV70 420 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 H1FNTQ75WM6 255 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-201ENST00000286835 BHLHE23Q8NDY6 225 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 FLVCR1-AS1Q8TAF5 88 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 CLCC1Q96S66 551 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 UTP23Q9BRU9 249 aaKnown RBP11.93□□□□□ -0.5
SCAF4-201ENST00000286835 LRRC61Q9BV99 259 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 CTSFQ9UBX1 484 aa11.93□□□□□ -0.5
SCAF4-201ENST00000286835 C19orf25Q9UFG5 118 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-201ENST00000286835 TMEM184BQ9Y519 407 aaPredicted RBP11.93□□□□□ -0.5
SCAF4-201ENST00000286835 TRAPPC6AO75865 159 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 SCGNO76038 276 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 SLC25A4P12235 298 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 ABCD3P28288 659 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 S100A2P29034 98 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 CCR5P51681 352 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 FUT7Q11130 342 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 CPEB2Q7Z5Q1 589 aaKnown RBP11.92□□□□□ -0.5
SCAF4-201ENST00000286835 TCTEX1D2Q8WW35 142 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 DDIT4LQ96D03 193 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 DUSP23Q9BVJ7 150 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 PHF3Q92576 2039 aaKnown RBP11.92□□□□□ -0.5
SCAF4-201ENST00000286835 SLC37A1P57057 533 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 FAM24BQ8N5W8 94 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 KIRREL1Q96J84 757 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 OR6C1Q96RD1 312 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 ZNF2Q9BSG1 426 aaPredicted RBP11.92□□□□□ -0.5
SCAF4-201ENST00000286835 SLC5A6Q9Y289 635 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 hCG_1809904A0A1W2PP81 198 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 A0A1W2PR64 198 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 A0A1W2PRV1 198 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 BGLAPP02818 100 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 FABP1P07148 127 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 OGFOD3Q6PK18 319 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 SEMA6DQ8NFY4 1073 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 SLC26A10Q8NG04 563 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 PTPMT1Q8WUK0 201 aaPredicted RBP11.92□□□□□ -0.5
SCAF4-201ENST00000286835 PRDM6Q9NQX0 595 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 LPAR3Q9UBY5 353 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 B3GALT5Q9Y2C3 310 aa11.92□□□□□ -0.5
SCAF4-201ENST00000286835 NPIPB9F8W1W9 429 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 RER1O15258 196 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 F2RL1P55085 397 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 HSD11B2P80365 405 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 HFEQ30201 348 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 NAT6Q93015 286 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 STRADBQ9C0K7 418 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 NXT1Q9UKK6 140 aaKnown RBP11.91□□□□□ -0.5
SCAF4-201ENST00000286835 DOCK8Q8NF50 2099 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 TLCD2A6NGC4 264 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 A6NLC8 198 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 PLPP3O14495 311 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 CD8AP01732 235 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 CHRM2P08172 466 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 ZNF260Q3ZCT1 412 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 PPP1R3BQ86XI6 285 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 EIF4E3Q8N5X7 224 aaKnown RBP11.91□□□□□ -0.5
SCAF4-201ENST00000286835 OR9K2Q8NGE7 335 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 C2orf50Q96LR7 162 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 NRIP2Q9BQI9 281 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 CNTNAP3Q9BZ76 1288 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 PNLIPRP2P54317 469 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 ZNF121P58317 390 aaPredicted RBP11.91□□□□□ -0.5
SCAF4-201ENST00000286835 ZNF674Q2M3X9 581 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 PRAMEF20Q5VT98 475 aa11.91□□□□□ -0.5
SCAF4-201ENST00000286835 RBMS3Q6XE24 437 aaKnown RBP11.91□□□□□ -0.5
SCAF4-201ENST00000286835 RRNAD1Q96FB5 475 aaKnown RBP11.91□□□□□ -0.5
SCAF4-201ENST00000286835 CCNL2Q96S94 520 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms