RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 LINC01553A4QN01 128 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 CDRT15L2A8MXV6 281 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 C9J4A7 227 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 H0YIG0 161 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 RFC3P40938 356 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 NKX2-1P43699 371 aaPredicted RBP14.07□□□□□ -0.16
USP43-201ENST00000285199 ZNF321PQ8N8H1 164 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 NKX2-4Q9H2Z4 354 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 MRPS18BQ9Y676 258 aaKnown RBP14.07□□□□□ -0.16
USP43-201ENST00000285199 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 A0A0G2JK05 382 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 EFSO43281 561 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 LMX1BO60663 402 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 PTP4A3O75365 173 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 YIF1AO95070 293 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 OR3A4PP47883 348 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 TMEM33P57088 247 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 ZNF117Q03924 483 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 MGAT2Q10469 447 aa14.07□□□□□ -0.16
USP43-201ENST00000285199 RPUSD4Q96CM3 377 aaKnown RBP14.07□□□□□ -0.16
USP43-201ENST00000285199 EP300Q09472 2414 aaPredicted RBP14.07□□□□□ -0.16
USP43-201ENST00000285199 DNAH12Q6ZR08 3092 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 THSD7AQ9UPZ6 1657 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 C7orf77A4D0Y5 90 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 IL9P15248 144 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 LAP3P28838 519 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 PEBP1P30086 187 aaKnown RBP14.06□□□□□ -0.16
USP43-201ENST00000285199 HSD17B7P56937 341 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 OR1D5P58170 312 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 OVCH2Q7RTZ1 564 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 OR56B2PQ8NGI1 322 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 INTS12Q96CB8 462 aaKnown RBP14.06□□□□□ -0.16
USP43-201ENST00000285199 LIN37Q96GY3 246 aaPredicted RBP14.06□□□□□ -0.16
USP43-201ENST00000285199 COX14Q96I36 57 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 SLC17A4Q9Y2C5 497 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 NYNRINQ9P2P1 1898 aaKnown RBP14.06□□□□□ -0.16
USP43-201ENST00000285199 MPDZO75970 2070 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 TFF2Q03403 129 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 CLEC18BQ6UXF7 455 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 OR1J1Q8NGS3 322 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 RNF128Q8TEB7 428 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 FGF14Q92915 247 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 MALSU1Q96EH3 234 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 LRRC37AA6NMS7 1700 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 IGKV1D-16P01601 117 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 PPICP45877 212 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 RRADP55042 308 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 OPN5Q6U736 354 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 LGI3Q8N145 548 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 APOBEC4Q8WW27 367 aaKnown RBP14.06□□□□□ -0.16
USP43-201ENST00000285199 NINJ1Q92982 152 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 PIPOXQ9P0Z9 390 aa14.06□□□□□ -0.16
USP43-201ENST00000285199 TMEM184BQ9Y519 407 aaPredicted RBP14.06□□□□□ -0.16
USP43-201ENST00000285199 MUC1P15941 1255 aaPredicted RBP14.05□□□□□ -0.16
USP43-201ENST00000285199 VEGFBP49765 207 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 IL10RAQ13651 578 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 HMGN3Q15651 99 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 PRRX2Q99811 253 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 SLC25A31Q9H0C2 315 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 GCM1Q9NP62 436 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 TMEM74BQ9NUR3 256 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 WASF3Q9UPY6 502 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 FREM3P0C091 2139 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 ZNF749O43361 778 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 ACAA2P42765 397 aaKnown RBP14.05□□□□□ -0.16
USP43-201ENST00000285199 OR2B11Q5JQS5 317 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 UQCC3Q6UW78 93 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 RBMS3Q6XE24 437 aaKnown RBP14.05□□□□□ -0.16
USP43-201ENST00000285199 ETV3LQ6ZN32 361 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 THNSL2Q86YJ6 484 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 KISS1RQ969F8 398 aaPredicted RBP14.05□□□□□ -0.16
USP43-201ENST00000285199 ZNF816-ZNF321PA0A0X1KG74 233 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 RAB27BO00194 218 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 DUS4LO95620 317 aaKnown RBP14.05□□□□□ -0.16
USP43-201ENST00000285199 TBX6O95947 436 aaPredicted RBP14.05□□□□□ -0.16
USP43-201ENST00000285199 HLA-DOBP13765 273 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 PLP2Q04941 152 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 C17orf67Q0P5P2 114 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 MPPED2Q15777 294 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 SHISA5Q8N114 240 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 ASB5Q8WWX0 329 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 SLC39A9Q9NUM3 307 aa14.05□□□□□ -0.16
USP43-201ENST00000285199 ARHGEF17Q96PE2 2063 aaPredicted RBP14.05□□□□□ -0.16
USP43-201ENST00000285199 PNPP00491 289 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 DPPA2Q7Z7J5 298 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 HEXA-AS1Q9H8Q6 139 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 TNFSF18Q9UNG2 199 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 HPP00738 406 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 CTSBP07858 339 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 PLGLB1Q02325 96 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 AADACL3Q5VUY0 350 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 SLC43A2Q8N370 569 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 EMG1Q92979 244 aaKnown RBP14.04□□□□□ -0.16
USP43-201ENST00000285199 POM121Q96HA1 1249 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 FOXQ1Q9C009 403 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 SHARPINQ9H0F6 387 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 RARRES3Q9UL19 164 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 MT-ATP6P00846 226 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 HNF1AP20823 631 aa14.04□□□□□ -0.16
USP43-201ENST00000285199 OTX2P32243 289 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms