RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 NT5CQ8TCD5 201 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 GPR87Q9BY21 358 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 PLEK2Q9NYT0 353 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 CT45A8P0DMV1 189 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 CT45A9P0DMV2 189 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 NTSR1P30989 418 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 CT45A2Q5DJT8 189 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 ANAPC16Q96DE5 110 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 MFAP5Q13361 173 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 ZNF787Q6DD87 383 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 MMP21Q8N119 569 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 LHX4Q969G2 390 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 C10orf35Q96D05 121 aa10.55□□□□□ -0.72
DNMT3A-201ENST00000264709 CXCL2P19875 107 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 CUTCQ9NTM9 273 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 RBFOX3A6NFN3 312 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 SFT2D2O95562 160 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 OR5AC1P0C628 307 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 HNRNPA2B1P22626 353 aaKnown RBP10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 NHLH2Q02577 135 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 ZNF684Q5T5D7 378 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 ADIPOR2Q86V24 386 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 INSM2Q96T92 566 aaPredicted RBP10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 PATZ1Q9HBE1 687 aaKnown RBP10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 UTS2O95399 124 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 LCATP04180 440 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 SQSTM1Q13501 440 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 NKAIN2Q5VXU1 208 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 BTNL8Q6UX41 500 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 ZNF729A6NN14 1252 aaPredicted RBP10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 MAT1AQ00266 395 aaKnown RBP10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 HAGHQ16775 308 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 RXFP4Q8TDU9 374 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 PSMF1Q92530 271 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 SULT1A2P50226 295 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 PIGPP57054 158 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 OR8G5Q8NG78 346 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 OR1F2PQ96R84 312 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 CHRDL1Q9BU40 450 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 NGBQ9NPG2 151 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 XKRY2A2RUG3 117 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 TCAPO15273 167 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 SUCLG1P53597 346 aaKnown RBP10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 SYT9Q86SS6 491 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 OR10A7Q8NGE5 316 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 GMPPAQ96IJ6 420 aaPredicted RBP10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 HHIPQ96QV1 700 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 ACY3Q96HD9 319 aa10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 MS4A7Q9GZW8 240 aaPredicted RBP10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 CGGBP1Q9UFW8 167 aaPredicted RBP10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 GDF2Q9UK05 429 aaPredicted RBP10.54□□□□□ -0.72
DNMT3A-201ENST00000264709 CDS2O95674 445 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 RAB7AP51149 207 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 PUSL1Q8N0Z8 303 aaKnown RBP10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 FGGYQ96C11 551 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 KCMF1Q9P0J7 381 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 A0A0B4J293 547 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 TMEM272A0A1B0GTI8 110 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 FSTP19883 344 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 CDCA3Q99618 268 aaPredicted RBP10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 ZNF2Q9BSG1 426 aaPredicted RBP10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 TUBA4BQ9H853 241 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 CHST11Q9NPF2 352 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 TRAPPC2LH3BP13 241 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 GLAP06280 429 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 HSF1Q00613 529 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 LMX1AQ8TE12 382 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 ARV1Q9H2C2 271 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 PCDHGA1Q9Y5H4 931 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 DUXBA0A1W2PPF3 345 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 SNCGO76070 127 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 IGF2P01344 180 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 FAM53BQ14153 422 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 NFATC4Q14934 902 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 CD99L2Q8TCZ2 262 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 ARRDC3Q96B67 414 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 MVB12AQ96EY5 273 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 AQP10Q96PS8 301 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 NPIPA5A0A0B4J1W7 369 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 hCG_1809904A0A1W2PP81 198 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 A0A1W2PPH5 198 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 A0A1W2PR64 198 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 A0A1W2PRV1 198 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 G3V3Q6 166 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 NKX2-2O95096 273 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 ACKR1Q16570 336 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 FAM57BQ71RH2 274 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 CCDC74BQ96LY2 380 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 AVPR2P30518 371 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 NTHL1P78549 312 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 CST9LP1Q5W188 147 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 GRASPQ7Z6J2 395 aaPredicted RBP10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 TRMT61AQ96FX7 289 aaKnown RBP10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 UTP23Q9BRU9 249 aaKnown RBP10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 APOOQ9BUR5 198 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 ACTR3CQ9C0K3 210 aaPredicted RBP10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 MANBALQ9NQG1 85 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 TCF20Q9UGU0 1960 aaKnown RBP10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 A0A1W2PPQ1 181 aa10.53□□□□□ -0.72
DNMT3A-201ENST00000264709 PRAMEF26H0Y7S4 382 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms