RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CCDC182A6NF36 153 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 ADAM20O43506 726 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 PRKYO43930 277 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 MITFO75030 526 aaPredicted RBP13.37□□□□□ -0.27
USE1-201ENST00000263897 FASP25445 335 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 PSMA6P60900 246 aaKnown RBP13.37□□□□□ -0.27
USE1-201ENST00000263897 C1orf146Q5VVC0 180 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 TEX36Q5VZQ5 186 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 CD276Q5ZPR3 534 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 KDM4DQ6B0I6 523 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 KCTD18Q6PI47 426 aaPredicted RBP13.37□□□□□ -0.27
USE1-201ENST00000263897 C12orf54Q6X4T0 127 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 DOK3Q7L591 496 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 FAM90A1Q86YD7 464 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 GALNT4Q8N4A0 578 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 FTMTQ8N4E7 242 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 ITPKCQ96DU7 683 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 LYZL4Q96KX0 146 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 PAPOLGQ9BWT3 736 aaKnown RBP13.37□□□□□ -0.27
USE1-201ENST00000263897 MS4A7Q9GZW8 240 aaPredicted RBP13.37□□□□□ -0.27
USE1-201ENST00000263897 KRT84Q9NSB2 600 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 ZNF391Q9UJN7 358 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 LRP12Q9Y561 859 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 MPC1Q9Y5U8 109 aa13.37□□□□□ -0.27
USE1-201ENST00000263897 NBEAL1Q6ZS30 2694 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 TMEM89A2RUT3 159 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 ACOD1A6NK06 481 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 C22orf46C9J442 243 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 CST4P01036 141 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 GYPAP02724 150 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 IGHV4-38-2P0DP08 117 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 ACKR3P25106 362 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 EPHA2P29317 976 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 CFHR2P36980 270 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 ACTG1P63261 375 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 IL5RAQ01344 420 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 LCN1P1Q5VSP4 162 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 SLX4IPQ5VYV7 408 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 WDR82Q6UXN9 313 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 MEPCEQ7L2J0 689 aaKnown RBP13.36□□□□□ -0.27
USE1-201ENST00000263897 AMIGO2Q86SJ2 522 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 ZDHHC13Q8IUH4 622 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 OR8B12Q8NGG6 310 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 LRRC29Q8WV35 223 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 GCDHQ92947 438 aaPredicted RBP13.36□□□□□ -0.27
USE1-201ENST00000263897 MICU1Q9BPX6 476 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 MROQ9BYG7 248 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 PRRG3Q9BZD7 231 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 TLNRD1Q9H1K6 362 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 RASSF4Q9H2L5 321 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 H2AFY2Q9P0M6 372 aaPredicted RBP13.36□□□□□ -0.27
USE1-201ENST00000263897 KAAG1Q9UBP8 84 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 TMEM14AQ9Y6G1 99 aa13.36□□□□□ -0.27
USE1-201ENST00000263897 TMEM269A0A1B0GVZ9 245 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 ANXA2P2A6NMY6 339 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 ZAR1LA6NP61 321 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 ZNF850A8MQ14 1090 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 PSMD9O00233 223 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 CDIPTO14735 213 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 ENSAO43768 121 aaKnown RBP13.35□□□□□ -0.27
USE1-201ENST00000263897 ZNF254O75437 659 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 PLATP00750 562 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 LIPFP07098 398 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 MRPL3P09001 348 aaKnown RBP13.35□□□□□ -0.27
USE1-201ENST00000263897 MUC1P15941 1255 aaPredicted RBP13.35□□□□□ -0.27
USE1-201ENST00000263897 EGR1P18146 543 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 DCTDP32321 178 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 COMPP49747 757 aaPredicted RBP13.35□□□□□ -0.27
USE1-201ENST00000263897 FGF12P61328 243 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 UBA52P62987 128 aaKnown RBP13.35□□□□□ -0.27
USE1-201ENST00000263897 CSNK2BP67870 215 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 ROM1Q03395 351 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 POU4F2Q12837 409 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 PRDX4Q13162 271 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 C9orf139Q6ZV77 190 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 BCDIN3DQ7Z5W3 292 aaKnown RBP13.35□□□□□ -0.27
USE1-201ENST00000263897 ZNF679Q8IYX0 411 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 TCEANCQ8N8B7 351 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 ASB17Q8WXJ9 295 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 LRTOMTQ8WZ04 291 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 OR5P3Q8WZ94 311 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 PIGCQ92535 297 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 ITFG2Q969R8 447 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 TECTBQ96PL2 329 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 ABCB9Q9NP78 766 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 FAM206AQ9NX38 181 aa13.35□□□□□ -0.27
USE1-201ENST00000263897 IGHV3OR15-7A0A075B7D8 119 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 IGHV3OR16-10A0A075B7F0 116 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 A0A0U1RQV5 110 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 PRR32B1ATL7 298 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 HAX1O00165 279 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 FCGR1AP12314 374 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 MAP2K3P46734 347 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 MICBQ29980 383 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 C11orf91Q3C1V1 193 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 FAM76BQ5HYJ3 339 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 AADACL4Q5VUY2 407 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 NXNL2Q5VZ03 156 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 C12orf73Q69YU5 71 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 KRT74Q7RTS7 529 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms