RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 MYO7BQ6PIF6 2116 aa11.93□□□□□ -0.5
VMP1-201ENST00000262291 XRCC3O43542 346 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 ATG12O94817 140 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 VAMP5O95183 116 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
VMP1-201ENST00000262291 RSPO1Q2MKA7 263 aaPredicted RBP11.92□□□□□ -0.5
VMP1-201ENST00000262291 BOLLQ8N9W6 283 aaKnown RBP11.92□□□□□ -0.5
VMP1-201ENST00000262291 OR1M1Q8NGA1 313 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 OR5D18Q8NGL1 313 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 FGFBP3Q8TAT2 258 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 KCNE4Q8WWG9 221 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 NARS2Q96I59 477 aaKnown RBP11.92□□□□□ -0.5
VMP1-201ENST00000262291 TINAGL1Q9GZM7 467 aaPredicted RBP11.92□□□□□ -0.5
VMP1-201ENST00000262291 ZNF703Q9H7S9 590 aaPredicted RBP11.92□□□□□ -0.5
VMP1-201ENST00000262291 PCDHGA1Q9Y5H4 931 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 CTDSPLO15194 276 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 H2AFB2P0C5Z0 115 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 FOSL1P15407 271 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 FSTP19883 344 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 BDKRB2P30411 391 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 MEOX2P50222 304 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 PCGF3Q3KNV8 242 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 PDSS1Q5T2R2 415 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 ZNF774Q6NX45 483 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 TMEM251Q8N6I4 163 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 C2CD4CQ8TF44 421 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 LYZL4Q96KX0 146 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 CMTM3Q96MX0 182 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 EDARQ9UNE0 448 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 NUBP2Q9Y5Y2 271 aa11.92□□□□□ -0.5
VMP1-201ENST00000262291 H7C2Y5 167 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 FGF2P09038 288 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 AIMP2Q13155 320 aaKnown RBP11.91□□□□□ -0.5
VMP1-201ENST00000262291 C10orf128Q5T292 105 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 ZNF813Q6ZN06 617 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.91□□□□□ -0.5
VMP1-201ENST00000262291 PIP4P1Q86T03 277 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 OR2AE1Q8NHA4 323 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 NANPQ8TBE9 248 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 MRPS24Q96EL2 167 aaKnown RBP11.91□□□□□ -0.5
VMP1-201ENST00000262291 DEFB127Q9H1M4 99 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 LIPGQ9Y5X9 500 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 ZNF292O60281 2723 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 ACOT7O00154 380 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 VEGFCP49767 419 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 MEOX1P50221 254 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 ZNF84P51523 738 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 CSRP2Q16527 193 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 KCNMB1Q16558 191 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 CEACAM16Q2WEN9 425 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 GPR137CQ8N3F9 429 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 GALNT16Q8N428 558 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 RELL2Q8NC24 303 aaPredicted RBP11.91□□□□□ -0.5
VMP1-201ENST00000262291 CALHM2Q9HA72 323 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 CA10Q9NS85 328 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 ABI3Q9P2A4 366 aa11.91□□□□□ -0.5
VMP1-201ENST00000262291 PTPRZ1P23471 2315 aaPredicted RBP11.91□□□□□ -0.5
VMP1-201ENST00000262291 A0A1W2PP11 408 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 ARPC1BO15143 372 aaKnown RBP11.9□□□□□ -0.5
VMP1-201ENST00000262291 ARPC5O15511 151 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 PMP22Q01453 160 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 PMPCAQ10713 525 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 SNAI3Q3KNW1 292 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 GJC3Q8NFK1 279 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 FNDC9Q8TBE3 224 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 C20orf85Q9H1P6 137 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 TMEM235A6NFC5 223 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 APOC1P02654 83 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 FAHP16930 419 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 WT1P19544 449 aaPredicted RBP11.9□□□□□ -0.5
VMP1-201ENST00000262291 OR3A4PP47883 348 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 LHX2P50458 406 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 FOXG1P55316 489 aaPredicted RBP11.9□□□□□ -0.5
VMP1-201ENST00000262291 HGFACQ04756 655 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 LINC00303Q3SY05 128 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 ZFP82Q8N141 532 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 CHST4Q8NCG5 386 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 OR5D14Q8NGL3 314 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 THRSPQ92748 146 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 MRI1Q9BV20 369 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 PLEKHA1Q9HB21 404 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 RHBDD3Q9Y3P4 386 aa11.9□□□□□ -0.5
VMP1-201ENST00000262291 SPENQ96T58 3664 aaKnown RBP11.9□□□□□ -0.51
VMP1-201ENST00000262291 A0A096LPE4 126 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 TRBV23-1A0A0A0MS06 115 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 A0A1W2PPZ6 126 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 ANKRD20A5PA0PJZ0 165 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 HCKP08631 526 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 LSM6P62312 80 aaKnown RBP11.89□□□□□ -0.51
VMP1-201ENST00000262291 UNC119Q13432 240 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 JMJD6Q6NYC1 403 aaPredicted RBP11.89□□□□□ -0.51
VMP1-201ENST00000262291 ADGRE4PQ86SQ3 457 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 ANGPTL5Q86XS5 388 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 LILRB2Q8N423 598 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 UXS1Q8NBZ7 420 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 OR1S1Q8NH92 325 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 PNPLA2Q96AD5 504 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 ADAT1Q9BUB4 502 aaKnown RBP11.89□□□□□ -0.51
VMP1-201ENST00000262291 BCL2L14Q9BZR8 327 aa11.89□□□□□ -0.51
VMP1-201ENST00000262291 BANF2Q9H503 90 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms