RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 IRS2Q9Y4H2 1338 aa19.4■□□□□ 0.7
RPP40-207ENST00000618533 RAD17O75943 681 aa19.39■□□□□ 0.69
RPP40-207ENST00000618533 RPS12P25398 132 aaKnown RBP19.39■□□□□ 0.69
RPP40-207ENST00000618533 LMOD1P29536 600 aaPredicted RBP19.39■□□□□ 0.69
RPP40-207ENST00000618533 PUM3Q15397 648 aaKnown RBP19.39■□□□□ 0.69
RPP40-207ENST00000618533 ATG9AQ7Z3C6 839 aa19.39■□□□□ 0.69
RPP40-207ENST00000618533 SSH3Q8TE77 659 aa19.39■□□□□ 0.69
RPP40-207ENST00000618533 HACL1Q9UJ83 578 aa19.39■□□□□ 0.69
RPP40-207ENST00000618533 WTIPA6NIX2 430 aaPredicted RBP19.38■□□□□ 0.69
RPP40-207ENST00000618533 POTECB2RU33 542 aa19.38■□□□□ 0.69
RPP40-207ENST00000618533 TOMM70O94826 608 aa19.38■□□□□ 0.69
RPP40-207ENST00000618533 POLA2Q14181 598 aa19.38■□□□□ 0.69
RPP40-207ENST00000618533 ZBTB40Q9NUA8 1239 aa19.38■□□□□ 0.69
RPP40-207ENST00000618533 CEP126Q9P2H0 1117 aa19.38■□□□□ 0.69
RPP40-207ENST00000618533 PNMA6EA0A0J9YXQ4 647 aa19.37■□□□□ 0.69
RPP40-207ENST00000618533 VIL1P09327 827 aaKnown RBP19.37■□□□□ 0.69
RPP40-207ENST00000618533 TXNRD3Q86VQ6 643 aa19.37■□□□□ 0.69
RPP40-207ENST00000618533 DPF2Q92785 391 aa19.37■□□□□ 0.69
RPP40-207ENST00000618533 SIL1Q9H173 461 aa19.37■□□□□ 0.69
RPP40-207ENST00000618533 USP17L3A6NCW0 530 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 USP17L4A6NCW7 530 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 PSMD14O00487 310 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 IFIT1P09914 478 aaKnown RBP19.36■□□□□ 0.69
RPP40-207ENST00000618533 KLRK1P26718 216 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 SCNN1DP51172 638 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 C20orf194Q5TEA3 1177 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 CEP85Q6P2H3 762 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 USP17L1Q7RTZ2 530 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 PNMA8AQ86V59 439 aaPredicted RBP19.36■□□□□ 0.69
RPP40-207ENST00000618533 RPAP2Q8IXW5 612 aaPredicted RBP19.36■□□□□ 0.69
RPP40-207ENST00000618533 RBM46Q8TBY0 533 aaKnown RBP19.36■□□□□ 0.69
RPP40-207ENST00000618533 TAF1DQ9H5J8 278 aaPredicted RBP19.36■□□□□ 0.69
RPP40-207ENST00000618533 C1orf115Q9H7X2 142 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 CD209Q9NNX6 404 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 GPRC5DQ9NZD1 345 aa19.36■□□□□ 0.69
RPP40-207ENST00000618533 PA2G4Q9UQ80 394 aaKnown RBP19.36■□□□□ 0.69
RPP40-207ENST00000618533 ZNF646O15015 1829 aaPredicted RBP19.36■□□□□ 0.69
RPP40-207ENST00000618533 MYO3BQ8WXR4 1341 aa19.35■□□□□ 0.69
RPP40-207ENST00000618533 ARAP2Q8WZ64 1704 aa19.35■□□□□ 0.69
RPP40-207ENST00000618533 SNAP23O00161 211 aa19.35■□□□□ 0.69
RPP40-207ENST00000618533 IL1R1P14778 569 aa19.35■□□□□ 0.69
RPP40-207ENST00000618533 FGFR2P21802 821 aa19.35■□□□□ 0.69
RPP40-207ENST00000618533 G3BP1Q13283 466 aaKnown RBP eCLIP19.35■□□□□ 0.69
RPP40-207ENST00000618533 CAVIN4Q5BKX8 364 aa19.35■□□□□ 0.69
RPP40-207ENST00000618533 STRIP1Q5VSL9 837 aa19.35■□□□□ 0.69
RPP40-207ENST00000618533 AGBL3Q8NEM8 1001 aa19.35■□□□□ 0.69
RPP40-207ENST00000618533 LPIN2Q92539 896 aa19.35■□□□□ 0.69
RPP40-207ENST00000618533 HMMRO75330 724 aa19.34■□□□□ 0.69
RPP40-207ENST00000618533 SLC5A1P13866 664 aa19.34■□□□□ 0.69
RPP40-207ENST00000618533 HIBADHP31937 336 aaKnown RBP19.34■□□□□ 0.69
RPP40-207ENST00000618533 EPHX2P34913 555 aa19.34■□□□□ 0.69
RPP40-207ENST00000618533 GMPSP49915 693 aaPredicted RBP19.34■□□□□ 0.69
RPP40-207ENST00000618533 MMP14P50281 582 aa19.34■□□□□ 0.69
RPP40-207ENST00000618533 AKAP2Q9Y2D5 859 aa19.34■□□□□ 0.69
RPP40-207ENST00000618533 RSBN1LQ6PCB5 846 aaPredicted RBP19.33■□□□□ 0.68
RPP40-207ENST00000618533 FAM84BQ96KN1 310 aaPredicted RBP19.33■□□□□ 0.68
RPP40-207ENST00000618533 KCNQ5Q9NR82 932 aa19.33■□□□□ 0.68
RPP40-207ENST00000618533 ADARB2Q9NS39 739 aaKnown RBP19.33■□□□□ 0.68
RPP40-207ENST00000618533 NOP58Q9Y2X3 529 aaKnown RBP19.33■□□□□ 0.68
RPP40-207ENST00000618533 ADAMTSL1Q8N6G6 1762 aa19.32■□□□□ 0.68
RPP40-207ENST00000618533 MYH13Q9UKX3 1938 aa19.32■□□□□ 0.68
RPP40-207ENST00000618533 H7C1D1 291 aa19.32■□□□□ 0.68
RPP40-207ENST00000618533 FSTL1Q12841 308 aa19.32■□□□□ 0.68
RPP40-207ENST00000618533 ATP2B3Q16720 1220 aa19.32■□□□□ 0.68
RPP40-207ENST00000618533 USP50Q70EL3 339 aaPredicted RBP19.32■□□□□ 0.68
RPP40-207ENST00000618533 FBXO33Q7Z6M2 555 aa19.32■□□□□ 0.68
RPP40-207ENST00000618533 VPS37DQ86XT2 251 aa19.32■□□□□ 0.68
RPP40-207ENST00000618533 SMC1BQ8NDV3 1235 aa19.32■□□□□ 0.68
RPP40-207ENST00000618533 ZBTB22O15209 634 aa19.31■□□□□ 0.68
RPP40-207ENST00000618533 SASH1O94885 1247 aa19.31■□□□□ 0.68
RPP40-207ENST00000618533 FKBP1AP62942 108 aaKnown RBP19.31■□□□□ 0.68
RPP40-207ENST00000618533 DACT2Q5SW24 774 aa19.31■□□□□ 0.68
RPP40-207ENST00000618533 TTLL5Q6EMB2 1281 aa19.31■□□□□ 0.68
RPP40-207ENST00000618533 LDHDQ86WU2 507 aa19.31■□□□□ 0.68
RPP40-207ENST00000618533 TDRD7Q8NHU6 1098 aaKnown RBP19.31■□□□□ 0.68
RPP40-207ENST00000618533 CNOT7Q9UIV1 285 aaKnown RBP19.31■□□□□ 0.68
RPP40-207ENST00000618533 SURF6O75683 361 aaKnown RBP19.3■□□□□ 0.68
RPP40-207ENST00000618533 EPS15P42566 896 aa19.3■□□□□ 0.68
RPP40-207ENST00000618533 GYG1P46976 350 aa19.3■□□□□ 0.68
RPP40-207ENST00000618533 C1QTNF8P60827 252 aa19.3■□□□□ 0.68
RPP40-207ENST00000618533 HSP90AB4PQ58FF6 505 aa19.3■□□□□ 0.68
RPP40-207ENST00000618533 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
RPP40-207ENST00000618533 FAM205AQ6ZU69 1335 aa19.29■□□□□ 0.68
RPP40-207ENST00000618533 GTF2IP78347 998 aa19.29■□□□□ 0.68
RPP40-207ENST00000618533 OS9Q13438 667 aaPredicted RBP19.29■□□□□ 0.68
RPP40-207ENST00000618533 AAMPQ13685 434 aa19.29■□□□□ 0.68
RPP40-207ENST00000618533 ERC1Q8IUD2 1116 aa19.29■□□□□ 0.68
RPP40-207ENST00000618533 MICALL2Q8IY33 904 aa19.29■□□□□ 0.68
RPP40-207ENST00000618533 GMLQ99445 158 aa19.29■□□□□ 0.68
RPP40-207ENST00000618533 GPR108Q9NPR9 543 aa19.29■□□□□ 0.68
RPP40-207ENST00000618533 TFCP2Q12800 502 aa19.28■□□□□ 0.68
RPP40-207ENST00000618533 GNL3LQ9NVN8 582 aaKnown RBP19.28■□□□□ 0.68
RPP40-207ENST00000618533 USP17L8P0C7I0 530 aa19.27■□□□□ 0.68
RPP40-207ENST00000618533 ZNF280AP59817 542 aaPredicted RBP19.27■□□□□ 0.68
RPP40-207ENST00000618533 EAPPQ56P03 285 aaPredicted RBP19.27■□□□□ 0.68
RPP40-207ENST00000618533 CHADLQ6NUI6 762 aa19.27■□□□□ 0.68
RPP40-207ENST00000618533 OGFOD1Q8N543 542 aa19.27■□□□□ 0.68
RPP40-207ENST00000618533 ZC3H15Q8WU90 426 aaKnown RBP19.27■□□□□ 0.68
RPP40-207ENST00000618533 FBXW7Q969H0 707 aa19.27■□□□□ 0.68
RPP40-207ENST00000618533 A0A1B0GUL7 405 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms