RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 GREM2Q9H772 168 aa6.16□□□□□ -1.42
SCARNA15-201ENST00000607520 NBPF26B4DH59 902 aa6.16□□□□□ -1.42
SCARNA15-201ENST00000607520 NBPF10Q6P3W6 841 aaKnown RBP6.16□□□□□ -1.42
SCARNA15-201ENST00000607520 TEX11Q8IYF3 940 aa6.16□□□□□ -1.42
SCARNA15-201ENST00000607520 STK11IPQ8N1F8 1099 aa6.16□□□□□ -1.42
SCARNA15-201ENST00000607520 NBPF15Q8N660 670 aa6.16□□□□□ -1.42
SCARNA15-201ENST00000607520 ECHDC1Q9NTX5 307 aa6.16□□□□□ -1.42
SCARNA15-201ENST00000607520 GOLIM4O00461 696 aa6.15□□□□□ -1.42
SCARNA15-201ENST00000607520 RGL2O15211 777 aa6.15□□□□□ -1.42
SCARNA15-201ENST00000607520 ZFYP08048 801 aaPredicted RBP6.15□□□□□ -1.42
SCARNA15-201ENST00000607520 SUCLG2Q96I99 432 aa6.15□□□□□ -1.42
SCARNA15-201ENST00000607520 AOC3Q16853 763 aa6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 UBAC1Q9BSL1 405 aa6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 SEC31BQ9NQW1 1179 aa6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 BSDC1Q9NW68 430 aaPredicted RBP6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 TMOD4Q9NZQ9 345 aa6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 PA2G4Q9UQ80 394 aaKnown RBP6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 ATP6V0A2Q9Y487 856 aa6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 IFT172Q9UG01 1749 aa6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 PDE4BQ07343 736 aa6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 INTS3Q68E01 1043 aaKnown RBP6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 RHPN1Q8TCX5 695 aa6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 RNF41Q9H4P4 317 aaPredicted RBP6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 SH2D4AQ9H788 454 aa6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 DISP2A7MBM2 1401 aa6.15□□□□□ -1.43
SCARNA15-201ENST00000607520 ECE1P42892 770 aa6.14□□□□□ -1.43
SCARNA15-201ENST00000607520 A0A1B0GUL7 405 aa6.14□□□□□ -1.43
SCARNA15-201ENST00000607520 IREB2P48200 963 aaKnown RBP6.14□□□□□ -1.43
SCARNA15-201ENST00000607520 C1QBPQ07021 282 aaKnown RBP6.14□□□□□ -1.43
SCARNA15-201ENST00000607520 TFCP2Q12800 502 aa6.14□□□□□ -1.43
SCARNA15-201ENST00000607520 PABPC4Q13310 644 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCARNA15-201ENST00000607520 SLC10A4Q96EP9 437 aa6.14□□□□□ -1.43
SCARNA15-201ENST00000607520 MPHOSPH6Q99547 160 aaKnown RBP6.14□□□□□ -1.43
SCARNA15-201ENST00000607520 ISCA1Q9BUE6 129 aa6.14□□□□□ -1.43
SCARNA15-201ENST00000607520 ECE2O60344 883 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 ZNF853P0CG23 659 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 NCLP19338 710 aaKnown RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 TBC1D10BQ4KMP7 808 aaPredicted RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 BEND3Q5T5X7 828 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 KRT26Q7Z3Y9 468 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 ZNF34Q8IZ26 560 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 AKT1S1Q96B36 256 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 SLIT3O75094 1523 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 MAGEB6P1A0A0J9YX57 407 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 POLRMTO00411 1230 aaKnown RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 NBPF7P0C2Y1 421 aaPredicted RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 MX1P20591 662 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 TRIM29Q14134 588 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 SLC9C2Q5TAH2 1124 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 IQCA1Q86XH1 822 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 TTLL11Q8NHH1 800 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 BACH2Q9BYV9 841 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 USP40Q9NVE5 1235 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 CDHR2Q9BYE9 1310 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 COL16A1Q07092 1604 aaPredicted RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 SEMA3EO15041 775 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 SCNN1DP51172 638 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 TIMM10P62072 90 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 ZRSR1Q15695 479 aaKnown RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 IMMTQ16891 758 aaKnown RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 CCDC96Q2M329 555 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 APOBEC3FQ8IUX4 373 aaKnown RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 HSCBQ8IWL3 235 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 CNOT7Q9UIV1 285 aaKnown RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 GOLGA6L22H0YM25 854 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 RANBP6O60518 1105 aaKnown RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 PDE8BO95263 885 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 GYG1P46976 350 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 SF3B3Q15393 1217 aaKnown RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 SMCR8Q8TEV9 937 aaPredicted RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 XAGE2Q96GT9 111 aa6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 SLKQ9H2G2 1235 aaPredicted RBP6.13□□□□□ -1.43
SCARNA15-201ENST00000607520 H7C1W4 665 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 MAP4K4O95819 1239 aaPredicted RBP6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 SRGNP10124 158 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 XBP1P17861 261 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 RPS12P25398 132 aaKnown RBP6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 PSMA5P28066 241 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 ANKRD44Q8N8A2 993 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 CELF1Q92879 486 aaKnown RBP6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 CCDC43Q96MW1 224 aaKnown RBP6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 AS3MTQ9HBK9 375 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 IVNS1ABPQ9Y6Y0 642 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 TCP10L2B9ZVM9 353 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 TCP10Q12799 353 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 TRAF1Q13077 416 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 NOL8Q76FK4 1167 aaKnown RBP6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 SPRYD3Q8NCJ5 442 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 SMC1BQ8NDV3 1235 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 RRAGCQ9HB90 399 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 MCM9Q9NXL9 1143 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 CEMIPQ8WUJ3 1361 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 TSPY2A6NKD2 308 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 B4DLN1 442 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 MRPL12P52815 198 aaKnown RBP6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 RASSF8Q8NHQ8 419 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 NRKQ7Z2Y5 1582 aa6.12□□□□□ -1.43
SCARNA15-201ENST00000607520 GNAT2P19087 354 aa6.11□□□□□ -1.43
SCARNA15-201ENST00000607520 IRX3P78415 501 aaPredicted RBP6.11□□□□□ -1.43
SCARNA15-201ENST00000607520 CCDC178Q5BJE1 867 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms