RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 PTPN12Q05209 780 aaKnown RBP12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 MPNDQ8N594 471 aa12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 ZNF594Q96JF6 807 aaPredicted RBP12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 ZNF277Q9NRM2 450 aaPredicted RBP12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
DDX55P1-201ENST00000603334 ANKRD18BA2A2Z9 1011 aa12.61□□□□□ -0.39
DDX55P1-201ENST00000603334 HSPA6P17066 643 aa12.61□□□□□ -0.39
DDX55P1-201ENST00000603334 C8orf34Q49A92 452 aa12.61□□□□□ -0.39
DDX55P1-201ENST00000603334 TTC22Q5TAA0 569 aa12.61□□□□□ -0.39
DDX55P1-201ENST00000603334 CELF1Q92879 486 aaKnown RBP12.61□□□□□ -0.39
DDX55P1-201ENST00000603334 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
DDX55P1-201ENST00000603334 AK9Q5TCS8 1911 aa12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 SASH1O94885 1247 aa12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 MX1P20591 662 aa12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 ITGA6P23229 1130 aa12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 IGHMBP2P38935 993 aaKnown RBP12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 PDE1AP54750 535 aa12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 BMP2KLQ5H9B9 411 aa12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 DPP8Q6V1X1 898 aaPredicted RBP12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 AACSQ86V21 672 aa12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 GREM2Q9H772 168 aa12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 ZNF541Q9H0D2 1346 aa12.6□□□□□ -0.39
DDX55P1-201ENST00000603334 EYA2O00167 538 aa12.59□□□□□ -0.39
DDX55P1-201ENST00000603334 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
DDX55P1-201ENST00000603334 TFCP2Q12800 502 aa12.59□□□□□ -0.39
DDX55P1-201ENST00000603334 GPATCH3Q96I76 525 aa12.59□□□□□ -0.39
DDX55P1-201ENST00000603334 CCDC8Q9H0W5 538 aaPredicted RBP12.59□□□□□ -0.39
DDX55P1-201ENST00000603334 SEC31BQ9NQW1 1179 aa12.59□□□□□ -0.39
DDX55P1-201ENST00000603334 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
DDX55P1-201ENST00000603334 FZD9O00144 591 aa12.58□□□□□ -0.4
DDX55P1-201ENST00000603334 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
DDX55P1-201ENST00000603334 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
DDX55P1-201ENST00000603334 TSHZ3Q63HK5 1081 aa12.58□□□□□ -0.4
DDX55P1-201ENST00000603334 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.4
DDX55P1-201ENST00000603334 EYA3Q99504 573 aa12.58□□□□□ -0.4
DDX55P1-201ENST00000603334 MPHOSPH8Q99549 860 aa12.58□□□□□ -0.4
DDX55P1-201ENST00000603334 ANKRD2Q9GZV1 360 aa12.58□□□□□ -0.4
DDX55P1-201ENST00000603334 CNNM1Q9NRU3 951 aa12.58□□□□□ -0.4
DDX55P1-201ENST00000603334 ERC2O15083 957 aa12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 LRRC24Q50LG9 513 aa12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 RILPL2Q969X0 211 aa12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 NEUROD6Q96NK8 337 aa12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 PUS3Q9BZE2 481 aaKnown RBP12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 OSBPL3Q9H4L5 887 aa12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 UPF2Q9HAU5 1272 aaKnown RBP12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 CEP126Q9P2H0 1117 aa12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 NSFL1CQ9UNZ2 370 aaKnown RBP12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 SPEF2Q9C093 1822 aa12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 XDHP47989 1333 aa12.57□□□□□ -0.4
DDX55P1-201ENST00000603334 POTEIP0CG38 1075 aa12.56□□□□□ -0.4
DDX55P1-201ENST00000603334 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
DDX55P1-201ENST00000603334 VEGFAP15692 232 aaPredicted RBP12.56□□□□□ -0.4
DDX55P1-201ENST00000603334 ATP2B4P23634 1241 aa12.56□□□□□ -0.4
DDX55P1-201ENST00000603334 KIAA2012Q0VF49 1180 aa12.56□□□□□ -0.4
DDX55P1-201ENST00000603334 LDHAL6AQ6ZMR3 332 aa12.56□□□□□ -0.4
DDX55P1-201ENST00000603334 L3MBTL3Q96JM7 780 aaPredicted RBP12.56□□□□□ -0.4
DDX55P1-201ENST00000603334 STAP2Q9UGK3 403 aa12.56□□□□□ -0.4
DDX55P1-201ENST00000603334 MINPP1Q9UNW1 487 aa12.56□□□□□ -0.4
DDX55P1-201ENST00000603334 ABCB7O75027 752 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 CDC45O75419 566 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 CIAO1O76071 339 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 GSPT1P15170 499 aaKnown RBP12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 SDSP20132 328 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 GPSM2P81274 684 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 TNNI3KQ59H18 835 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 CASC1Q6TDU7 716 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 LARGE2Q8N3Y3 721 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 TBC1D16Q8TBP0 767 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 EAF2Q96CJ1 260 aaPredicted RBP12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 ANKIB1Q9P2G1 1089 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 GGA1Q9UJY5 639 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 FBXO3Q9UK99 471 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 LEMD3Q9Y2U8 911 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 FPGT-TNNI3KV9GXZ4 949 aa12.55□□□□□ -0.4
DDX55P1-201ENST00000603334 AOX1Q06278 1338 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 TTC41PQ6P2S7 1318 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 MAP4K4O95819 1239 aaPredicted RBP12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 MFAP1P55081 439 aaKnown RBP12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 FSTL1Q12841 308 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 METTL24Q5JXM2 366 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 ATG9AQ7Z3C6 839 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 NIM1KQ8IY84 436 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 ECHDC1Q9NTX5 307 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 SALL3Q9BXA9 1300 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 EIF6P56537 245 aaKnown RBP12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 HTRA3P83110 453 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 GORABQ5T7V8 394 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 ZC3H12CQ9C0D7 883 aaKnown RBP12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 POLLQ9UGP5 575 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 ZNRF3Q9ULT6 936 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 AKAP2Q9Y2D5 859 aa12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.54□□□□□ -0.4
DDX55P1-201ENST00000603334 ZNF646O15015 1829 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms