RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 USP50Q70EL3 339 aaPredicted RBP14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 DDX46Q7L014 1031 aaKnown RBP14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 TMC4Q7Z404 712 aa14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 RBM17Q96I25 401 aaKnown RBP14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 CDC5LQ99459 802 aaKnown RBP14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 COPRSQ9NQ92 184 aa14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 TLL2Q9Y6L7 1015 aa14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 AKAP11Q9UKA4 1901 aa14.48□□□□□ -0.09
CHMP2A-207ENST00000600804 SHTN1A0MZ66 631 aa14.47□□□□□ -0.09
CHMP2A-207ENST00000600804 PPIP5K2O43314 1243 aa14.47□□□□□ -0.09
CHMP2A-207ENST00000600804 BBOX1O75936 387 aa14.47□□□□□ -0.09
CHMP2A-207ENST00000600804 CXCL9Q07325 125 aa14.47□□□□□ -0.09
CHMP2A-207ENST00000600804 GRAPQ13588 217 aa14.47□□□□□ -0.09
CHMP2A-207ENST00000600804 GRAPLQ8TC17 118 aaPredicted RBP14.47□□□□□ -0.09
CHMP2A-207ENST00000600804 GPRC5DQ9NZD1 345 aa14.47□□□□□ -0.09
CHMP2A-207ENST00000600804 NOP58Q9Y2X3 529 aaKnown RBP14.47□□□□□ -0.09
CHMP2A-207ENST00000600804 ATP6V0A2Q9Y487 856 aa14.47□□□□□ -0.09
CHMP2A-207ENST00000600804 ZNF646O15015 1829 aaPredicted RBP14.47□□□□□ -0.09
CHMP2A-207ENST00000600804 PDE4DIPQ5VU43 2346 aa14.46□□□□□ -0.09
CHMP2A-207ENST00000600804 HIRAP54198 1017 aaPredicted RBP14.46□□□□□ -0.09
CHMP2A-207ENST00000600804 PTPN12Q05209 780 aaKnown RBP14.46□□□□□ -0.09
CHMP2A-207ENST00000600804 GRM1Q13255 1194 aa14.46□□□□□ -0.09
CHMP2A-207ENST00000600804 NIM1KQ8IY84 436 aa14.46□□□□□ -0.09
CHMP2A-207ENST00000600804 GPR101Q96P66 508 aaPredicted RBP14.46□□□□□ -0.09
CHMP2A-207ENST00000600804 RTFDC1Q9BY42 306 aaPredicted RBP14.46□□□□□ -0.09
CHMP2A-207ENST00000600804 GLIS2Q9BZE0 524 aaPredicted RBP14.46□□□□□ -0.09
CHMP2A-207ENST00000600804 CIAO1O76071 339 aa14.45□□□□□ -0.1
CHMP2A-207ENST00000600804 GMPSP49915 693 aaPredicted RBP14.45□□□□□ -0.1
CHMP2A-207ENST00000600804 RPS8P62241 208 aaKnown RBP14.45□□□□□ -0.1
CHMP2A-207ENST00000600804 DLK2Q6UY11 383 aa14.45□□□□□ -0.1
CHMP2A-207ENST00000600804 PAXIP1Q6ZW49 1069 aaPredicted RBP14.45□□□□□ -0.1
CHMP2A-207ENST00000600804 SEC31BQ9NQW1 1179 aa14.45□□□□□ -0.1
CHMP2A-207ENST00000600804 ADARB2Q9NS39 739 aaKnown RBP14.45□□□□□ -0.1
CHMP2A-207ENST00000600804 BSDC1Q9NW68 430 aaPredicted RBP14.45□□□□□ -0.1
CHMP2A-207ENST00000600804 CHMP3Q9Y3E7 222 aa14.45□□□□□ -0.1
CHMP2A-207ENST00000600804 YDJCA8MPS7 323 aa14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 IGHMBP2P38935 993 aaKnown RBP14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 GRIPAP1Q4V328 841 aa14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 HSP90AB4PQ58FF6 505 aa14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 SAPCD2Q86UD0 394 aa14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 ANKRD18AQ8IVF6 992 aa14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 TRPM4Q8TD43 1214 aa14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 ZIC5Q96T25 663 aa14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 RWDD1Q9H446 243 aaPredicted RBP14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 DCTPP1Q9H773 170 aa14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 PGAP2Q9UHJ9 254 aa14.44□□□□□ -0.1
CHMP2A-207ENST00000600804 SPEF2Q9C093 1822 aa14.43□□□□□ -0.1
CHMP2A-207ENST00000600804 EYA2O00167 538 aa14.43□□□□□ -0.1
CHMP2A-207ENST00000600804 SLC34A2O95436 690 aa14.43□□□□□ -0.1
CHMP2A-207ENST00000600804 CELF1Q92879 486 aaKnown RBP14.43□□□□□ -0.1
CHMP2A-207ENST00000600804 CCDC85AQ96PX6 553 aaPredicted RBP14.43□□□□□ -0.1
CHMP2A-207ENST00000600804 ZNRF3Q9ULT6 936 aa14.43□□□□□ -0.1
CHMP2A-207ENST00000600804 CELF2O95319 508 aaKnown RBP14.42□□□□□ -0.1
CHMP2A-207ENST00000600804 IL15P40933 162 aaPredicted RBP14.42□□□□□ -0.1
CHMP2A-207ENST00000600804 ECE1P42892 770 aa14.42□□□□□ -0.1
CHMP2A-207ENST00000600804 KIAA2012Q0VF49 1180 aa14.42□□□□□ -0.1
CHMP2A-207ENST00000600804 TAF7LQ5H9L4 462 aa14.42□□□□□ -0.1
CHMP2A-207ENST00000600804 SP8Q8IXZ3 490 aa14.42□□□□□ -0.1
CHMP2A-207ENST00000600804 GCC1Q96CN9 775 aa14.42□□□□□ -0.1
CHMP2A-207ENST00000600804 MPHOSPH8Q99549 860 aa14.42□□□□□ -0.1
CHMP2A-207ENST00000600804 PPP4R2Q9NY27 417 aa14.42□□□□□ -0.1
CHMP2A-207ENST00000600804 RIPOR2Q9Y4F9 1068 aa14.42□□□□□ -0.1
CHMP2A-207ENST00000600804 RAB11FIP3O75154 756 aa14.41□□□□□ -0.1
CHMP2A-207ENST00000600804 RAD17O75943 681 aa14.41□□□□□ -0.1
CHMP2A-207ENST00000600804 RGS19P49795 217 aa14.41□□□□□ -0.1
CHMP2A-207ENST00000600804 LDHAL6AQ6ZMR3 332 aa14.41□□□□□ -0.1
CHMP2A-207ENST00000600804 ERC1Q8IUD2 1116 aa14.41□□□□□ -0.1
CHMP2A-207ENST00000600804 SMC5Q8IY18 1101 aa14.41□□□□□ -0.1
CHMP2A-207ENST00000600804 VPS33BQ9H267 617 aa14.41□□□□□ -0.1
CHMP2A-207ENST00000600804 A0A1B0GUL6 1792 aa14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 CCDC85CA6NKD9 419 aa14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 MAP2K2P36507 400 aa14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 G3BP1Q13283 466 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 CIAPIN1Q6FI81 312 aa14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 DPP8Q6V1X1 898 aaPredicted RBP14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 ATG9AQ7Z3C6 839 aa14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 MPNDQ8N594 471 aa14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 ZNF594Q96JF6 807 aaPredicted RBP14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 PA2G4Q9UQ80 394 aaKnown RBP14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 MROH5Q6ZUA9 1318 aa14.4□□□□□ -0.1
CHMP2A-207ENST00000600804 SURF6O75683 361 aaKnown RBP14.39□□□□□ -0.11
CHMP2A-207ENST00000600804 EGFRP00533 1210 aa14.39□□□□□ -0.11
CHMP2A-207ENST00000600804 KLHDC4Q8TBB5 520 aa14.39□□□□□ -0.11
CHMP2A-207ENST00000600804 MCOLN1Q9GZU1 580 aa14.39□□□□□ -0.11
CHMP2A-207ENST00000600804 PODXL2Q9NZ53 605 aa14.39□□□□□ -0.11
CHMP2A-207ENST00000600804 MINPP1Q9UNW1 487 aa14.39□□□□□ -0.11
CHMP2A-207ENST00000600804 IGHDP01880 384 aa14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 LRRC24Q50LG9 513 aa14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 VGLL2Q8N8G2 317 aa14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 SUPT20HQ8NEM7 779 aa14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 HHIPL1Q96JK4 782 aa14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 PUS3Q9BZE2 481 aaKnown RBP14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 ANKRD2Q9GZV1 360 aa14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 ZNF408Q9H9D4 720 aa14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 GPR108Q9NPR9 543 aa14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 CNNM1Q9NRU3 951 aa14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 ZBTB12Q9Y330 459 aaPredicted RBP14.38□□□□□ -0.11
CHMP2A-207ENST00000600804 CENPQQ7L2Z9 268 aaPredicted RBP14.37□□□□□ -0.11
CHMP2A-207ENST00000600804 ZC3H15Q8WU90 426 aaKnown RBP14.37□□□□□ -0.11
CHMP2A-207ENST00000600804 KIF1BPQ96EK5 621 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms