RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 PDE8BO95263 885 aa22.74■■□□□ 1.23
ZNF558-204ENST00000596172 MVPQ14764 893 aaKnown RBP22.74■■□□□ 1.23
ZNF558-204ENST00000596172 METTL24Q5JXM2 366 aa22.74■■□□□ 1.23
ZNF558-204ENST00000596172 ATG9AQ7Z3C6 839 aa22.74■■□□□ 1.23
ZNF558-204ENST00000596172 DPF2Q92785 391 aa22.74■■□□□ 1.23
ZNF558-204ENST00000596172 RPS12P25398 132 aaKnown RBP22.73■■□□□ 1.23
ZNF558-204ENST00000596172 KLRK1P26718 216 aa22.73■■□□□ 1.23
ZNF558-204ENST00000596172 LMOD1P29536 600 aaPredicted RBP22.73■■□□□ 1.23
ZNF558-204ENST00000596172 GMPSP49915 693 aaPredicted RBP22.73■■□□□ 1.23
ZNF558-204ENST00000596172 PNMA8AQ86V59 439 aaPredicted RBP22.73■■□□□ 1.23
ZNF558-204ENST00000596172 GPRC5DQ9NZD1 345 aa22.73■■□□□ 1.23
ZNF558-204ENST00000596172 EPHX2P34913 555 aa22.72■■□□□ 1.23
ZNF558-204ENST00000596172 FSTL1Q12841 308 aa22.72■■□□□ 1.23
ZNF558-204ENST00000596172 CHMP4BQ9H444 224 aaKnown RBP22.72■■□□□ 1.23
ZNF558-204ENST00000596172 DDX19BQ9UMR2 479 aa22.72■■□□□ 1.23
ZNF558-204ENST00000596172 SCN4AP35499 1836 aa22.72■■□□□ 1.23
ZNF558-204ENST00000596172 USP17L3A6NCW0 530 aa22.71■■□□□ 1.23
ZNF558-204ENST00000596172 USP17L4A6NCW7 530 aa22.71■■□□□ 1.23
ZNF558-204ENST00000596172 IL15P40933 162 aaPredicted RBP22.71■■□□□ 1.23
ZNF558-204ENST00000596172 ATP8B2P98198 1209 aa22.71■■□□□ 1.23
ZNF558-204ENST00000596172 USP17L1Q7RTZ2 530 aa22.71■■□□□ 1.23
ZNF558-204ENST00000596172 CD209Q9NNX6 404 aa22.71■■□□□ 1.23
ZNF558-204ENST00000596172 IL1R1P14778 569 aa22.7■■□□□ 1.22
ZNF558-204ENST00000596172 EPS15P42566 896 aa22.7■■□□□ 1.22
ZNF558-204ENST00000596172 ZNF804AQ7Z570 1209 aa22.7■■□□□ 1.22
ZNF558-204ENST00000596172 PA2G4Q9UQ80 394 aaKnown RBP22.7■■□□□ 1.22
ZNF558-204ENST00000596172 COG6Q9Y2V7 657 aa22.7■■□□□ 1.22
ZNF558-204ENST00000596172 ZNF609O15014 1411 aa22.7■■□□□ 1.22
ZNF558-204ENST00000596172 PNMA6EA0A0J9YXQ4 647 aa22.69■■□□□ 1.22
ZNF558-204ENST00000596172 FGFR2P21802 821 aa22.69■■□□□ 1.22
ZNF558-204ENST00000596172 POLA2Q14181 598 aa22.69■■□□□ 1.22
ZNF558-204ENST00000596172 PUM3Q15397 648 aaKnown RBP22.69■■□□□ 1.22
ZNF558-204ENST00000596172 STRIP1Q5VSL9 837 aa22.69■■□□□ 1.22
ZNF558-204ENST00000596172 RSBN1LQ6PCB5 846 aaPredicted RBP22.69■■□□□ 1.22
ZNF558-204ENST00000596172 SMC1BQ8NDV3 1235 aa22.69■■□□□ 1.22
ZNF558-204ENST00000596172 AGBL3Q8NEM8 1001 aa22.69■■□□□ 1.22
ZNF558-204ENST00000596172 SSH3Q8TE77 659 aa22.69■■□□□ 1.22
ZNF558-204ENST00000596172 SIL1Q9H173 461 aa22.69■■□□□ 1.22
ZNF558-204ENST00000596172 ADARB2Q9NS39 739 aaKnown RBP22.69■■□□□ 1.22
ZNF558-204ENST00000596172 CEP126Q9P2H0 1117 aa22.69■■□□□ 1.22
ZNF558-204ENST00000596172 ZBTB12Q9Y330 459 aaPredicted RBP22.69■■□□□ 1.22
ZNF558-204ENST00000596172 USP50Q70EL3 339 aaPredicted RBP22.68■■□□□ 1.22
ZNF558-204ENST00000596172 LDHDQ86WU2 507 aa22.68■■□□□ 1.22
ZNF558-204ENST00000596172 FAM84BQ96KN1 310 aaPredicted RBP22.68■■□□□ 1.22
ZNF558-204ENST00000596172 GMLQ99445 158 aa22.68■■□□□ 1.22
ZNF558-204ENST00000596172 ZBTB40Q9NUA8 1239 aa22.68■■□□□ 1.22
ZNF558-204ENST00000596172 CNOT7Q9UIV1 285 aaKnown RBP22.68■■□□□ 1.22
ZNF558-204ENST00000596172 DACT2Q5SW24 774 aa22.67■■□□□ 1.22
ZNF558-204ENST00000596172 C20orf194Q5TEA3 1177 aa22.67■■□□□ 1.22
ZNF558-204ENST00000596172 FBXO33Q7Z6M2 555 aa22.67■■□□□ 1.22
ZNF558-204ENST00000596172 A0A1B0GUL6 1792 aa22.67■■□□□ 1.22
ZNF558-204ENST00000596172 H7C1D1 291 aa22.66■■□□□ 1.22
ZNF558-204ENST00000596172 HIBADHP31937 336 aaKnown RBP22.66■■□□□ 1.22
ZNF558-204ENST00000596172 TTLL5Q6EMB2 1281 aa22.66■■□□□ 1.22
ZNF558-204ENST00000596172 CHADLQ6NUI6 762 aa22.66■■□□□ 1.22
ZNF558-204ENST00000596172 LPIN2Q92539 896 aa22.66■■□□□ 1.22
ZNF558-204ENST00000596172 C1orf115Q9H7X2 142 aa22.66■■□□□ 1.22
ZNF558-204ENST00000596172 IFIT1P09914 478 aaKnown RBP22.65■■□□□ 1.22
ZNF558-204ENST00000596172 MMP14P50281 582 aa22.65■■□□□ 1.22
ZNF558-204ENST00000596172 MICALL2Q8IY33 904 aa22.65■■□□□ 1.22
ZNF558-204ENST00000596172 TDRD7Q8NHU6 1098 aaKnown RBP22.65■■□□□ 1.22
ZNF558-204ENST00000596172 SCN9AQ15858 1988 aa22.65■■□□□ 1.22
ZNF558-204ENST00000596172 MYO3BQ8WXR4 1341 aa22.64■■□□□ 1.22
ZNF558-204ENST00000596172 SASH1O94885 1247 aa22.64■■□□□ 1.21
ZNF558-204ENST00000596172 POTEIP0CG38 1075 aa22.64■■□□□ 1.21
ZNF558-204ENST00000596172 POTEJP0CG39 1038 aa22.64■■□□□ 1.21
ZNF558-204ENST00000596172 GYG1P46976 350 aa22.64■■□□□ 1.21
ZNF558-204ENST00000596172 EAPPQ56P03 285 aaPredicted RBP22.64■■□□□ 1.21
ZNF558-204ENST00000596172 CAVIN4Q5BKX8 364 aa22.64■■□□□ 1.21
ZNF558-204ENST00000596172 CEP85Q6P2H3 762 aa22.64■■□□□ 1.21
ZNF558-204ENST00000596172 SLC5A1P13866 664 aa22.63■■□□□ 1.21
ZNF558-204ENST00000596172 RRP1P56182 461 aaKnown RBP22.63■■□□□ 1.21
ZNF558-204ENST00000596172 ZNF280AP59817 542 aaPredicted RBP22.63■■□□□ 1.21
ZNF558-204ENST00000596172 FKBP1AP62942 108 aaKnown RBP22.63■■□□□ 1.21
ZNF558-204ENST00000596172 GTF2IP78347 998 aa22.63■■□□□ 1.21
ZNF558-204ENST00000596172 G3BP1Q13283 466 aaKnown RBP eCLIP22.63■■□□□ 1.21
ZNF558-204ENST00000596172 NOP58Q9Y2X3 529 aaKnown RBP22.63■■□□□ 1.21
ZNF558-204ENST00000596172 ATP2B3Q16720 1220 aa22.62■■□□□ 1.21
ZNF558-204ENST00000596172 RPAP2Q8IXW5 612 aaPredicted RBP22.62■■□□□ 1.21
ZNF558-204ENST00000596172 ZC3H15Q8WU90 426 aaKnown RBP22.62■■□□□ 1.21
ZNF558-204ENST00000596172 PGAP2Q9UHJ9 254 aa22.62■■□□□ 1.21
ZNF558-204ENST00000596172 FAM205AQ6ZU69 1335 aa22.61■■□□□ 1.21
ZNF558-204ENST00000596172 USP17L8P0C7I0 530 aa22.61■■□□□ 1.21
ZNF558-204ENST00000596172 VPS37DQ86XT2 251 aa22.61■■□□□ 1.21
ZNF558-204ENST00000596172 CLEC11AQ9Y240 323 aa22.61■■□□□ 1.21
ZNF558-204ENST00000596172 AKAP2Q9Y2D5 859 aa22.61■■□□□ 1.21
ZNF558-204ENST00000596172 SHTN1A0MZ66 631 aa22.6■■□□□ 1.21
ZNF558-204ENST00000596172 ZBTB22O15209 634 aa22.6■■□□□ 1.21
ZNF558-204ENST00000596172 HIRAP54198 1017 aaPredicted RBP22.6■■□□□ 1.21
ZNF558-204ENST00000596172 TFCP2Q12800 502 aa22.6■■□□□ 1.21
ZNF558-204ENST00000596172 PSME4Q14997 1843 aa22.59■■□□□ 1.21
ZNF558-204ENST00000596172 ADAMTSL1Q8N6G6 1762 aa22.59■■□□□ 1.21
ZNF558-204ENST00000596172 HSPA6P17066 643 aa22.59■■□□□ 1.21
ZNF558-204ENST00000596172 BCAMP50895 628 aa22.59■■□□□ 1.21
ZNF558-204ENST00000596172 TRPM4Q8TD43 1214 aa22.59■■□□□ 1.21
ZNF558-204ENST00000596172 FBXW7Q969H0 707 aa22.59■■□□□ 1.21
ZNF558-204ENST00000596172 SURF6O75683 361 aaKnown RBP22.58■■□□□ 1.21
ZNF558-204ENST00000596172 SAMD7Q7Z3H4 446 aa22.58■■□□□ 1.21
ZNF558-204ENST00000596172 MXD3Q9BW11 206 aa22.58■■□□□ 1.21
ZNF558-204ENST00000596172 ITGBL1O95965 494 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms